RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 KLRC4O43908 158 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 TBCAO75347 108 aaKnown RBP13.11□□□□□ -0.31
RCL1-208ENST00000448872 PLS3P13797 630 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 SYN1P17600 705 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 NPTX2P47972 431 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 ZNF131P52739 623 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 MBTPS1Q14703 1052 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 NME8Q8N427 588 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 DPF3Q92784 378 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 SCLYQ96I15 445 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 SCLT1Q96NL6 688 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 FDXACB1Q9BRP7 624 aaPredicted RBP13.11□□□□□ -0.31
RCL1-208ENST00000448872 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 CLSTN2Q9H4D0 955 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 IFT122Q9HBG6 1241 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
RCL1-208ENST00000448872 FRMD3A2A2Y4 597 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 SLC16A4O15374 487 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 EVI5O60447 810 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 RPN1P04843 607 aaKnown RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 SELPP16109 830 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 FGFR4P22455 802 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 RBL2Q08999 1139 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 COASYQ13057 564 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 BFSP2Q13515 415 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 GPNMBQ14956 572 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 ODR4Q5SWX8 454 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 LRRC8DQ7L1W4 858 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 PARVGQ9HBI0 331 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 TRPV2Q9Y5S1 764 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 MBD3O95983 291 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
RCL1-208ENST00000448872 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 FAM26DQ5JW98 314 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 CCDC155Q8N6L0 562 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
RCL1-208ENST00000448872 M0QZ92 97 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 ASAP2O43150 1006 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 TRAK2O60296 914 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 NBNO60934 754 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 CAND2O75155 1236 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 TIMP1P01033 207 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 EDN1P05305 212 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 GHRP10912 638 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 NAMPTP43490 491 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 CASP5P51878 434 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 CRYBB1P53674 252 aaPredicted RBP13.09□□□□□ -0.31
RCL1-208ENST00000448872 EHHADHQ08426 723 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 LPIN1Q14693 890 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
RCL1-208ENST00000448872 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 CCDC65Q8IXS2 484 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
RCL1-208ENST00000448872 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
RCL1-208ENST00000448872 KMT5AQ9NQR1 393 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
RCL1-208ENST00000448872 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
RCL1-208ENST00000448872 TCHHQ07283 1943 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 K7ENM7 598 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 MYL1P05976 194 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 MYBP10242 640 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 DARSP14868 501 aaKnown RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 RAG1P15918 1043 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 GAP43P17677 238 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 EIF4BP23588 611 aaKnown RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 PTENP60484 403 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 MBTD1Q05BQ5 628 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 TFDP1Q14186 410 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 TCTN1Q2MV58 587 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms