RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 DESP17661 470 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 TRIM42Q8IWZ5 723 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 HOMEZQ8IX15 550 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 LBHD1Q9BQE6 289 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 METTL5Q9NRN9 209 aaKnown RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 NKIRAS1Q9NYS0 192 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 ANAPC4Q9UJX5 808 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 PITPNM2Q9BZ72 1349 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 TIAM2Q8IVF5 1701 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 LAD1O00515 517 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 UBTFL6P0CB48 400 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 FAM200BP0CF97 657 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RARGP13631 454 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RCN1Q15293 331 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 KHDC1Q4VXA5 237 aaKnown RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 CEP128Q6ZU80 1094 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 MAGEB18Q96M61 343 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 GRHL1Q9NZI5 618 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 MYMKA6NI61 221 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SIGLEC16A6NMB1 481 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 FOXO6A8MYZ6 492 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 PDE8BO95263 885 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 GCP02774 474 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 MARK3P27448 753 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 TECP42680 631 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 RPL21P46778 160 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 OCRLQ01968 901 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ADCY1Q08828 1119 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF211Q13398 564 aaPredicted RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ARHGEF18Q6ZSZ5 1173 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC7A6OSQ96CW6 309 aaPredicted RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 DDX50Q9BQ39 737 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 CHKBQ9Y259 395 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 BZW2Q9Y6E2 419 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 USH1CQ9Y6N9 552 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 BCL9O00512 1426 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 PVALEFA0A1B0GWK0 134 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 EYA4O95677 639 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ZCCHC18P0CG32 403 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 CABP4P57796 275 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 IRF2BP2Q7Z5L9 587 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ANKRD23Q86SG2 305 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 GATA6Q92908 595 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 NT5C3AQ9H0P0 336 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 LARSQ9P2J5 1176 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 MROH7Q68CQ1 1323 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 CBX6O95503 412 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 ACSL3O95573 720 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 OR52Z1P0C646 297 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SFSWAPQ12872 951 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 MPP2Q14168 576 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 KPNB1Q14974 876 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 PROM2Q8N271 834 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 HELBQ8NG08 1087 aaPredicted RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC4A7Q9Y6M7 1214 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 DCTN3O75935 186 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 YARSP54577 528 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 LRRC74BQ6ZQY2 392 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 GLIS3Q8NEA6 775 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 HIC2Q96JB3 615 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 SPATA16Q9BXB7 569 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 RPL26L1Q9UNX3 145 aaKnown RBP10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 PFASO15067 1338 aa10.13□□□□□ -0.79
SYNPO2-204ENST00000448416 USP54Q70EL1 1684 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 CAPN9O14815 690 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 ACTN1P12814 892 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 PLCG2P16885 1265 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 USP46P62068 366 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 STRN3Q13033 797 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 MYOCDQ8IZQ8 938 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 U2AF1L4Q8WU68 220 aaKnown RBP10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 AZIN2Q96A70 460 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 CDK5RAP3Q96JB5 506 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 CRAMP1Q96RY5 1269 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 GANQ9H2C0 597 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 TNRQ92752 1358 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 CYP2D7A0A087X1C5 515 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 PODXLO00592 558 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 ECE2O60344 883 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 CSF1RP07333 972 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 TAC1P20366 129 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 RASGRF1Q13972 1273 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms