RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TBC1D7Q9P0N9 293 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 ZNF215Q9UL58 517 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 FHOD3Q2V2M9 1422 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 NEMP1O14524 444 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 SNRPA1P09661 255 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 SURF1Q15526 300 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 APOA5Q6Q788 366 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 CLMNQ96JQ2 1002 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 FRMD6Q96NE9 622 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 ANKRD27Q96NW4 1050 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 G3BP2Q9UN86 482 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 STX11O75558 287 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 NLRP11P59045 1033 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 FCHO2Q0JRZ9 810 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 STX4Q12846 297 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 TRIM25Q14258 630 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 PLA2G4DQ86XP0 818 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 PLEKHA4Q9H4M7 779 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
NIPBL-202ENST00000448238 LIMA1Q9UHB6 759 aaKnown RBP9.48□□□□□ -0.89
NIPBL-202ENST00000448238 GMNCA6NCL1 334 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ECE2O60344 883 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 DHX34Q14147 1143 aaKnown RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ZNF618Q5T7W0 954 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 GALNT17Q6IS24 598 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 TPH2Q8IWU9 490 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 EGFL8Q99944 293 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 IPPQ9Y573 584 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 AKAP10O43572 662 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 MED26O95402 600 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 GMFBP60983 142 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 CABP7Q86V35 215 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 OR8H2Q8N162 312 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ZNF219Q9P2Y4 722 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 NRBP1Q9UHY1 535 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 GRM8O00222 908 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 MLNP12872 115 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 RCVRNP35243 200 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 LAMB3Q13751 1172 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 KIAA0408Q6ZU52 694 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 WDR36Q8NI36 951 aaKnown RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 XPO4Q9C0E2 1151 aaKnown RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 WWP2O00308 870 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 AXIN1O15169 862 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 BAIAP3O94812 1187 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ATXN8OSP0DMR3 200 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 PDE1AP54750 535 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 MTERF2Q49AM1 385 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 SPATA1Q5VX52 437 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 CAMK1DQ8IU85 385 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 HDHD2Q9H0R4 259 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 SYNJ2BP-COX16A0A087WUM0 186 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 EXTL3O43909 919 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 AKR1D1P51857 326 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 GPR141Q7Z602 305 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ZBED8Q8IZ13 594 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 EXT2Q93063 718 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 BCL2L14Q9BZR8 327 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 RHBDL2Q9NX52 303 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 COX16Q9P0S2 106 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 PCDHA12Q9UN75 941 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 LRRC53A6NM62 1247 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 EVPLLA8MZ36 301 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 FOSP01100 380 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 PGM1P36871 562 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 MAGEA10P43363 369 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ITGB3BPQ13352 177 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ATP13A5Q4VNC0 1218 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 TIGD7Q6NT04 549 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-202ENST00000448238 MSANTD1Q6ZTZ1 278 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
NIPBL-202ENST00000448238 LRPAP1P30533 357 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 KDRP35968 1356 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 POLGP54098 1239 aaPredicted RBP9.46□□□□□ -0.89
NIPBL-202ENST00000448238 IDI1Q13907 227 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 CTNNAL1Q9UBT7 734 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 CCDC162PA2VCL2 907 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 ERN1O75460 977 aaKnown RBP9.46□□□□□ -0.89
NIPBL-202ENST00000448238 MYL1P05976 194 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 FAM102BQ5T8I3 360 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 PANK4Q9NVE7 773 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 RWDD2AQ9UIY3 292 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 MEI4A8MW99 385 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 F8W031 263 aaPredicted RBP9.46□□□□□ -0.89
NIPBL-202ENST00000448238 K7ENM7 598 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 CENPAP49450 140 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms