RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TMEM143Q96AN5 459 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 CCSER1Q9C0I3 900 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 MTIF3Q9H2K0 278 aaKnown RBP15.72■□□□□ 0.11
SREBF1-207ENST00000447641 ERVK-5Q9HDB9 667 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 NOC2LQ9Y3T9 749 aaKnown RBP15.72■□□□□ 0.11
SREBF1-207ENST00000447641 MTCH2Q9Y6C9 303 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 SLC4A7Q9Y6M7 1214 aa15.72■□□□□ 0.11
SREBF1-207ENST00000447641 ASAP2O43150 1006 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 PPP6R2O75170 966 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 CA3P07451 260 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 DARSP14868 501 aaKnown RBP15.71■□□□□ 0.11
SREBF1-207ENST00000447641 CYP11B2P19099 503 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 EIF4BP23588 611 aaKnown RBP15.71■□□□□ 0.11
SREBF1-207ENST00000447641 CD52P31358 61 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 WDR5P61964 334 aaKnown RBP15.71■□□□□ 0.11
SREBF1-207ENST00000447641 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 CABP7Q86V35 215 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 ZNF410Q86VK4 478 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 KRI1Q8N9T8 703 aaKnown RBP15.71■□□□□ 0.11
SREBF1-207ENST00000447641 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 FAM122AQ96E09 287 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 OSMRQ99650 979 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 MTRQ99707 1265 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 IFT122Q9HBG6 1241 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 C5orf42Q9H799 3197 aa15.71■□□□□ 0.11
SREBF1-207ENST00000447641 TCHHQ07283 1943 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 ZBBXA8MT70 800 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 E9PMD0 336 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 SPTLC2O15270 562 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 ATP2A2P16615 1042 aaKnown RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 POU3F3P20264 500 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 UBA7P41226 1012 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 POU5F1BQ06416 359 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 LAMTOR4Q0VGL1 99 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 MXD4Q14582 209 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 PADI6Q6TGC4 694 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 RTN4RL1Q86UN2 441 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 KSR1Q8IVT5 923 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 PSPC1Q8WXF1 523 aaKnown RBP15.7■□□□□ 0.1
SREBF1-207ENST00000447641 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 BHMT2Q9H2M3 363 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 EPHX3Q9H6B9 360 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 CERS4Q9HA82 394 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 RCOR1Q9UKL0 485 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 TTC3P53804 2025 aa15.7■□□□□ 0.1
SREBF1-207ENST00000447641 A0A087WZ62 844 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 ENPP3O14638 875 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 DNM1Q05193 864 aaKnown RBP15.69■□□□□ 0.1
SREBF1-207ENST00000447641 STK38Q15208 465 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 AXDND1Q5T1B0 1012 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-207ENST00000447641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
SREBF1-207ENST00000447641 FAM228AQ86W67 206 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-207ENST00000447641 RHPN2Q8IUC4 686 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 PPP1R16BQ96T49 567 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 SLC9A7Q96T83 725 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-207ENST00000447641 C11orf16Q9NQ32 467 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 ST3GAL5Q9UNP4 418 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 GINS2Q9Y248 185 aa15.69■□□□□ 0.1
SREBF1-207ENST00000447641 ATG2AQ2TAZ0 1938 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 TRIOO75962 3097 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 GPR182O15218 404 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 USO1O60763 962 aaKnown RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 RPS6KA5O75582 802 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 DEFB103AP81534 67 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 PAK2Q13177 524 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 DSC3Q14574 896 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 FOXD4L6Q3SYB3 417 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 ODR4Q5SWX8 454 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 RINT1Q6NUQ1 792 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 FOXD4L3Q6VB84 417 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 ASAP3Q8TDY4 903 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 NLRP7Q8WX94 980 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 LINC01599Q8WXQ3 324 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 ZNF668Q96K58 619 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
SREBF1-207ENST00000447641 LRFN3Q9BTN0 628 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
SREBF1-207ENST00000447641 FTHL17Q9BXU8 183 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms