RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TMEM221A6NGB7 291 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SAC3D1A6NKF1 404 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NCAM2O15394 837 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CHMP2AO43633 222 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ECDO95905 644 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 IFNA16P05015 189 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NAT1P18440 290 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GNAT2P19087 354 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TKTP29401 623 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 SNX17Q15036 470 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 KARSQ15046 597 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 SNX30Q5VWJ9 437 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NEPROQ6NW34 567 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TMEM53Q6P2H8 277 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TTC30BQ8N4P2 665 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FNBP1Q96RU3 617 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GAL3ST1Q99999 423 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GPAMQ9HCL2 828 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 METTL5Q9NRN9 209 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 IGSF9Q9P2J2 1179 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SMIM23A6NLE4 172 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SNTNA6NMZ2 147 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 I3L4J1 428 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TLR3O15455 904 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 PDPK1O15530 556 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PTPN4P29074 926 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 EPS8Q12929 822 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 DHX34Q14147 1143 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 NR1D2Q14995 579 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 UBE2J2Q8N2K1 259 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ARL6IP6Q8N6S5 226 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 DEPTORQ8TB45 409 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SPIRE2Q8WWL2 714 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 APPBP2Q92624 585 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 COG3Q96JB2 828 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 C7orf26Q96N11 449 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 KRT12Q99456 494 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 EHD1Q9H4M9 534 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GIMAP4Q9NUV9 329 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SNX9Q9Y5X1 595 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 AGLP35573 1532 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TRAFD1O14545 582 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ITGAXP20702 1163 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HNRNPFP52597 415 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 SRP54P61011 504 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 SLC15A2Q16348 729 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RUNDC3AQ59EK9 446 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 COLGALT2Q8IYK4 626 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SCYL3Q8IZE3 742 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GIMAP1Q8WWP7 306 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 DLG3Q92796 817 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 WDR24Q96S15 920 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TMEM168Q9H0V1 697 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ANKHQ9HCJ1 492 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 AMOTL2Q9Y2J4 779 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FAM32AQ9Y421 112 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 AFF2P51816 1311 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MYO5CQ9NQX4 1742 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TEX51A0A1B0GUA7 166 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PNMA8CA0A1B0GUJ8 204 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 C16orf96A6NNT2 1141 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MIF4GDA9UHW6 222 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ASLP04424 464 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PDHA1P08559 390 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NUDT17P0C025 328 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RPS6KB1P23443 525 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MTHFSP49914 203 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 THOP1P52888 689 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SLC18A1P54219 525 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PKP1Q13835 747 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MMEL1Q495T6 779 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 DSTYKQ6XUX3 929 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PPP4R3CPQ6ZMV5 832 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GSTA5Q7RTV2 222 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HAUS6Q7Z4H7 955 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 UBL4BQ8N7F7 174 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PDZD8Q8NEN9 1154 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 KCNV2Q8TDN2 545 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TP53INP1Q96A56 240 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RMDN3Q96TC7 470 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HGH1Q9BTY7 390 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PABPC3Q9H361 631 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.11□□□□□ -1.913e-7■■■■■ 34.2
CHD9-203ENST00000447540 STRN4Q9NRL3 753 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 DBF4Q9UBU7 674 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 GLS2Q9UI32 602 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SYNJ2O15056 1496 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PLEKHG1Q9ULL1 1385 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TSPOAP1O95153 1857 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RIMS1Q86UR5 1692 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 DPPA5A6NC42 116 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MTSS1O43312 755 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CRTAPO75718 401 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 CD2BP2O95400 341 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ABCB4P21439 1286 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 F8A1P23610 371 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RAB25P57735 213 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RAPGEF1Q13905 1077 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 IL23RQ5VWK5 629 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms