RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 STRNO43815 780 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 KINO60870 393 aaKnown RBP6.25□□□□□ -1.41
SDCBP-205ENST00000447267 NME2P22392 152 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 CST5P28325 142 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-205ENST00000447267 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 COL28A1Q2UY09 1125 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 ZC3H14Q6PJT7 736 aaKnown RBP6.25□□□□□ -1.41
SDCBP-205ENST00000447267 UBALD2Q8IYN6 164 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 PHAXQ9H814 394 aaKnown RBP6.25□□□□□ -1.41
SDCBP-205ENST00000447267 SLC5A4Q9NY91 659 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 NRBP1Q9UHY1 535 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 FAM184BQ9ULE4 1060 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 BARX2Q9UMQ3 279 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-205ENST00000447267 SORCS3Q9UPU3 1222 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 KNSTRNQ9Y448 316 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 FRYLO94915 3013 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 MYO7AQ13402 2215 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 C19orf81C9J6K1 198 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 GRM6O15303 877 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 RNGTTO60942 597 aaKnown RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 DUSP11O75319 330 aaKnown RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 ENTPD3O75355 529 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 IQCF3P0C7M6 154 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 PTGS1P23219 599 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 RBM10P98175 930 aaKnown RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 COASYQ13057 564 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 SPECC1Q5M775 1068 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 CATSPERGQ6ZRH7 1159 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 FBXO33Q7Z6M2 555 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 HEXIM2Q96MH2 286 aaKnown RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
SDCBP-205ENST00000447267 ZHX1Q9UKY1 873 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-205ENST00000447267 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
SDCBP-205ENST00000447267 PYCARD-AS1I3L0S3 204 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 BAIAP3O94812 1187 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 PAPLNO95428 1278 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 SNAI1O95863 264 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-205ENST00000447267 CELA3AP09093 270 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 TXKP42681 527 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 MAPK8P45983 427 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 OXCT1P55809 520 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 GJA9P57773 515 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 PTPN11Q06124 597 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-205ENST00000447267 GPNMBQ14956 572 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 CYP27C1Q4G0S4 372 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 ADGRD2Q7Z7M1 963 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 TOP6BLQ8N6T0 577 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 RTP3Q9BQQ7 232 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 APOL5Q9BWW9 433 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 IDI2Q9BXS1 227 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 ALDH8A1Q9H2A2 487 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-205ENST00000447267 CNPY2Q9Y2B0 182 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 RAI2Q9Y5P3 530 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 MYO18BQ8IUG5 2567 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 IGF2RP11717 2491 aa6.23□□□□□ -1.41
SDCBP-205ENST00000447267 A0A1B0GUL6 1792 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 ANKRD18BA2A2Z9 1011 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 C1QL1O75973 258 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 IGKV5-2P06315 115 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 CSF1RP07333 972 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 CD8BP10966 210 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 PDE4CQ08493 712 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 PLS1Q14651 629 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 CC2D1BQ5T0F9 858 aaKnown RBP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 UBE3BQ7Z3V4 1068 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 RBM23Q86U06 439 aaKnown RBP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 RNF214Q8ND24 703 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 SUSD6Q92537 303 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 SECISBP2LQ93073 1101 aaKnown RBP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 UPF3AQ9H1J1 476 aaKnown RBP6.22□□□□□ -1.41
SDCBP-205ENST00000447267 SPC25Q9HBM1 224 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 ERVK-5Q9HDB9 667 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 RNF19AQ9NV58 838 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 CDH22Q9UJ99 828 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 PCOLCE2Q9UKZ9 415 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 SLC5A6Q9Y289 635 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 SALL1Q9NSC2 1324 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 RALGAPA2Q2PPJ7 1873 aa6.22□□□□□ -1.41
SDCBP-205ENST00000447267 LOC285556D6RIA3 1793 aa6.21□□□□□ -1.41
SDCBP-205ENST00000447267 CEP295Q9C0D2 2601 aa6.21□□□□□ -1.41
SDCBP-205ENST00000447267 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 TMEM8BA6NDV4 472 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 GLP2RO95838 553 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 DCNP07585 359 aaKnown RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 FCER1AP12319 257 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 RFC2P35250 354 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 LPAL2Q16609 132 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 OGFOD2Q6N063 350 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 MAP4K1Q92918 833 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms