RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAM129CQ86XR2 697 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 TSPEARQ8WU66 669 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 FAM84AQ96KN4 292 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 NOB1Q9ULX3 412 aaKnown RBP5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 A0A0G2JNJ9 132 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 KIF3BO15066 747 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 NDUFS2O75306 463 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 IL13P35225 146 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADCY8P40145 1251 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADKP55263 362 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CAP1Q01518 475 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 MLC1Q15049 377 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CNKSR3Q6P9H4 555 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 TRMT10BQ6PF06 316 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 OTOP2Q7RTS6 562 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 FATE1Q969F0 183 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 DYDC2Q96IM9 177 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPP1R16BQ96T49 567 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ACE2Q9BYF1 805 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CSRNP2Q9H175 543 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 POLR3BQ9NW08 1133 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 SAE1Q9UBE0 346 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 Q9UFV3 132 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6CA6NDK9 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6BA6NDN3 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6DP0CG33 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZNF28P17035 718 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ATF3P18847 181 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 POLD1P28340 1107 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 NRG3P56975 720 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 CDK17Q00537 523 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GTF2H3Q13889 308 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GAREM2Q75VX8 874 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SAPCD2Q86UD0 394 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GLB1L2Q8IW92 636 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TPH2Q8IWU9 490 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 MIER2Q8N344 545 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 PAWRQ96IZ0 340 aaKnown RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 PWWP2AQ96N64 755 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLC2A13Q96QE2 648 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 EPB41L4AQ9HCS5 686 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6AQ9NYA3 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 EVLQ9UI08 416 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TUBD1Q9UJT1 453 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 CNOT6Q9ULM6 557 aaKnown RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 FANCIQ9NVI1 1328 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TCAF2A6NFQ2 919 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 RFXAPO00287 272 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 KLHL18O94889 574 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 PI3P19957 117 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 AKAP5P24588 427 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ETV4P43268 484 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLC16A1P53985 500 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ANTXR2P58335 489 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 KIF23Q02241 960 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 MALLQ13021 153 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TOP3AQ13472 1001 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TCIRG1Q13488 830 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SSPNQ14714 243 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 EIF4HQ15056 248 aaKnown RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 MAN2A1Q16706 1144 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 RRP12Q5JTH9 1297 aaKnown RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 BTNL9Q6UXG8 535 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ATG14Q6ZNE5 492 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 C14orf80Q86SX3 495 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 IFNL2Q8IZJ0 200 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 BCL6BQ8N143 479 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 THEMISQ8N1K5 641 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPP1R14CQ8TAE6 165 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TTC8Q8TAM2 541 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 L2HGDHQ9H9P8 463 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 NTMQ9P121 344 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 EEA1Q15075 1411 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 A0A0A6YYK5 440 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PRC1O43663 620 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 CCT2P78371 535 aaKnown RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADRM1Q16186 407 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 GFOD2Q3B7J2 385 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 LMBR1LQ6UX01 489 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms