RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ATP2C1P98194 919 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-203ENST00000445704 FAM102BQ5T8I3 360 aa20.92■□□□□ 0.94
HDAC4-203ENST00000445704 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC4-203ENST00000445704 ASAP3Q8TDY4 903 aa20.92■□□□□ 0.94
HDAC4-203ENST00000445704 CCDC43Q96MW1 224 aaKnown RBP20.92■□□□□ 0.94
HDAC4-203ENST00000445704 FOXD4L1Q9NU39 408 aa20.92■□□□□ 0.94
HDAC4-203ENST00000445704 TRANK1O15050 2925 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 FGFR1P11362 822 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 ZSCAN20P17040 1043 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 CTNNB1P35222 781 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 CCT6AP40227 531 aaKnown RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 PDIA5Q14554 519 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 HAUS3Q68CZ6 603 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 RNF149Q8NC42 400 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 CLP1Q92989 425 aaKnown RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 NACC1Q96RE7 527 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 INO80BQ9C086 356 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 ELAC1Q9H777 363 aaKnown RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 RNF19AQ9NV58 838 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 TMEM161AQ9NX61 479 aa20.91■□□□□ 0.94
HDAC4-203ENST00000445704 DBR1Q9UK59 544 aaKnown RBP20.91■□□□□ 0.94
HDAC4-203ENST00000445704 PRRC2BQ5JSZ5 2229 aaKnown RBP20.9■□□□□ 0.94
HDAC4-203ENST00000445704 FNDC1Q4ZHG4 1894 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-203ENST00000445704 VPS37CA5D8V6 355 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-203ENST00000445704 CDC25AP30304 524 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 ARL2P36404 184 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 CAPSQ13938 189 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 CATSPER4Q7RTX7 472 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 ECHDC2Q86YB7 292 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 SNX29Q8TEQ0 813 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 INTS4Q96HW7 963 aaKnown RBP20.9■□□□□ 0.94
HDAC4-203ENST00000445704 GPRC5CQ9NQ84 441 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 HCSTQ9UBK5 93 aa20.9■□□□□ 0.94
HDAC4-203ENST00000445704 TBKBP1A7MCY6 615 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 C5orf67F2Z3F1 127 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 H3BNC9 293 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 ASAP2O43150 1006 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 ATF7P17544 494 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-203ENST00000445704 MUTP22033 750 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 GLRA2P23416 452 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 BMPR1AP36894 532 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 GPM6BQ13491 265 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 DTHD1Q6ZMT9 781 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 SRGAP1Q7Z6B7 1085 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 SNX21Q969T3 373 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 MMTAG2Q9BU76 263 aaKnown RBP20.89■□□□□ 0.93
HDAC4-203ENST00000445704 POLR3FQ9H1D9 316 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-203ENST00000445704 CHST12Q9NRB3 414 aa20.89■□□□□ 0.93
HDAC4-203ENST00000445704 PIN4Q9Y237 131 aaKnown RBP20.89■□□□□ 0.93
HDAC4-203ENST00000445704 A0A0U1RQF3 1178 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 SYT1P21579 422 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 MXD4Q14582 209 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-203ENST00000445704 MAEAQ7L5Y9 396 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 BRAPQ7Z569 592 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 ZNF598Q86UK7 904 aaKnown RBP20.88■□□□□ 0.93
HDAC4-203ENST00000445704 RAB34Q9BZG1 259 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 AGPAT5Q9NUQ2 364 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-203ENST00000445704 LMCD1Q9NZU5 365 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 KIAA1024Q9UPX6 916 aa20.88■□□□□ 0.93
HDAC4-203ENST00000445704 PDCP20941 246 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 PHKA2P46019 1235 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 PTENP60484 403 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 PADI6Q6TGC4 694 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 IFNLR1Q8IU57 520 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-203ENST00000445704 RNF169Q8NCN4 708 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 DDX19AQ9NUU7 478 aaKnown RBP20.87■□□□□ 0.93
HDAC4-203ENST00000445704 DACT1Q9NYF0 836 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 RWDD3Q9Y3V2 267 aa20.87■□□□□ 0.93
HDAC4-203ENST00000445704 ARHGEF35A5YM69 484 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 VWA3AA6NCI4 1184 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 RB1P06400 928 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 RESTQ13127 1097 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 TFDP1Q14186 410 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 CLLU1OSQ5K130 101 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 KRT79Q5XKE5 535 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 TWF2Q6IBS0 349 aaKnown RBP20.86■□□□□ 0.93
HDAC4-203ENST00000445704 KCNK18Q7Z418 384 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 MRPL38Q96DV4 380 aaKnown RBP20.86■□□□□ 0.93
HDAC4-203ENST00000445704 CASD1Q96PB1 797 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 TRAIPQ9BWF2 469 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 BHMT2Q9H2M3 363 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 ATG2AQ2TAZ0 1938 aa20.86■□□□□ 0.93
HDAC4-203ENST00000445704 PRUNE2Q8WUY3 3088 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 E9PMD0 336 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 GRM6O15303 877 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 CYP11B2P19099 503 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 HOXA11P31270 313 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-203ENST00000445704 MBTD1Q05BQ5 628 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 POU5F1BQ06416 359 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
HDAC4-203ENST00000445704 LRRC55Q6ZSA7 311 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 MCPH1Q8NEM0 835 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 BSNDQ8WZ55 320 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 C11orf84Q9BUA3 381 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-203ENST00000445704 TMEM117Q9H0C3 514 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 CWH43Q9H720 699 aa20.85■□□□□ 0.93
HDAC4-203ENST00000445704 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
HDAC4-203ENST00000445704 MTMR6Q9Y217 621 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms