RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ZNF862O60290 1169 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 KRT13P13646 458 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 FAM193AP78312 1265 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 BFSP1Q12934 665 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 APOBEC3FQ8IUX4 373 aaKnown RBP18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 KAT5Q92993 513 aa18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 INTS2Q9H0H0 1204 aaKnown RBP18.31■□□□□ 0.52
LAPTM4B-201ENST00000445593 PLS3P13797 630 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 CKAP4Q07065 602 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 MTERF2Q49AM1 385 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 GADL1Q6ZQY3 521 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 CBWD2Q8IUF1 395 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 R3HDMLQ9H3Y0 253 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 PDE11AQ9HCR9 933 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 ANO9A1A5B4 782 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 N4BP1O75113 896 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 MYBL2P10244 700 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 PPP3CAQ08209 521 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 VGLL4Q14135 290 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 BEND6Q5SZJ8 279 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 WDR78Q5VTH9 848 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 MSANTD4Q8NCY6 345 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 TEX13BQ9BXU2 312 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 ANKRD63C9JTQ0 380 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 TTLL12Q14166 644 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 BRD3Q15059 726 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 CCDC60Q8IWA6 550 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 NSUN6Q8TEA1 469 aaKnown RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 LRRC1Q9BTT6 524 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 TOPORSQ9NS56 1045 aaPredicted RBP18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 NAGPAQ9UK23 515 aa18.3■□□□□ 0.52
LAPTM4B-201ENST00000445593 ERLIN1O75477 346 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 ZNF662Q6ZS27 426 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 NEK9Q8TD19 979 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 SYN2Q92777 582 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 ACCSQ96QU6 501 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 PCDHA10Q9Y5I2 948 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 DENND3A2RUS2 1198 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 ECM2O94769 699 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 STAT1P42224 750 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 LMBRD2Q68DH5 695 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 PALB2Q86YC2 1186 aa18.29■□□□□ 0.52
LAPTM4B-201ENST00000445593 LOC102724159A0A0B4J2E5 919 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 DLATP10515 647 aaKnown RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 PWP2Q15269 919 aaKnown RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 TAF3Q5VWG9 929 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 PHLDB3Q6NSJ2 640 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 PLEKHO2Q8TD55 490 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 BICD1Q96G01 975 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 SGIP1Q9BQI5 828 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 ELP3Q9H9T3 547 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 RBAK-RBAKDNI3L0D1 243 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 DDX3XO00571 662 aaKnown RBP eCLIP18.28■□□□□ 0.523e-11■■■■■ 40.6
LAPTM4B-201ENST00000445593 PPP1R37O75864 691 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 KRT76Q01546 638 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 NAB2Q15742 525 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 NCAPG2Q86XI2 1143 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 SPATA4Q8NEY3 305 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 RBM12Q9NTZ6 932 aaKnown RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 KCND2Q9NZV8 630 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 DMGDHQ9UI17 866 aaKnown RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 GRID2IPA4D2P6 1211 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 F8VZ95 297 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 PJA2O43164 708 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 NPTX2P47972 431 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 VAMP7P51809 220 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 SP2Q02086 613 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 CATSPERGQ6ZRH7 1159 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 ARHGEF19Q8IW93 802 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 CLMNQ96JQ2 1002 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 JPH1Q9HDC5 661 aaPredicted RBP18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 TAS2R14Q9NYV8 317 aa18.28■□□□□ 0.52
LAPTM4B-201ENST00000445593 ESYT3A0FGR9 886 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 H3BQF6 201 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 FOXN3O00409 490 aaPredicted RBP18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 KCNK3O14649 394 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 CALCAP01258 141 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 ADRB2P07550 413 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 JAK3P52333 1124 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms