RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 SH3GLB2Q9NR46 395 aa11.32□□□□□ -0.6
HDLBP-221ENST00000444092 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
HDLBP-221ENST00000444092 NR2E1Q9Y466 385 aa11.32□□□□□ -0.6
HDLBP-221ENST00000444092 NT5C1B-RDH14C9J2C7 533 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 SFPQP23246 707 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 BCAR1P56945 870 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 SSRP1Q08945 709 aaKnown RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 IER5LQ5T953 404 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 TWF2Q6IBS0 349 aaKnown RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 PRSS33Q8NF86 280 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 RDM1Q8NG50 284 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 GJA10Q969M2 543 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 AGXT2Q9BYV1 514 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
HDLBP-221ENST00000444092 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
HDLBP-221ENST00000444092 A0A087WZ62 844 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 CPLX1O14810 134 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 EDIL3O43854 480 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 PSMD10O75832 226 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 REC8O95072 547 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 CXCL14O95715 111 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 SKIP12755 728 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 DRP2Q13474 957 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 LONRF3Q496Y0 759 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 Q4G0T1 1027 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 RHPN2Q8IUC4 686 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 SH2D3AQ9BRG2 576 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 NIFKQ9BYG3 293 aaKnown RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
HDLBP-221ENST00000444092 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
HDLBP-221ENST00000444092 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CARNS1A5YM72 827 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 TMEM150BA6NC51 233 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CLASP2O75122 1294 aaKnown RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 DEXIO95424 95 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 TDP2O95551 362 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 PHKA2P46019 1235 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 ITIH3Q06033 890 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 GLB1LQ6UWU2 654 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 VPS52Q8N1B4 723 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 RSPH1Q8WYR4 309 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 LPPQ93052 612 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 NLRP4Q96MN2 994 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 JPH2Q9BR39 696 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CDH22Q9UJ99 828 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 INPP5FQ9Y2H2 1132 aa11.29□□□□□ -0.6
HDLBP-221ENST00000444092 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
HDLBP-221ENST00000444092 CYP3A7-CYP3A51PA0A087WV96 503 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-221ENST00000444092 CYP3A7P24462 503 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 AVPR2P30518 371 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 MTHFRP42898 656 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 RAB27AP51159 221 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
HDLBP-221ENST00000444092 EVCP57679 992 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 PSMC5P62195 406 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 GIT2Q14161 759 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDLBP-221ENST00000444092 RARS2Q5T160 578 aaKnown RBP11.28□□□□□ -0.6
HDLBP-221ENST00000444092 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 IRF2BPLQ9H1B7 796 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 FAM105AQ9NUU6 356 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
HDLBP-221ENST00000444092 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
HDLBP-221ENST00000444092 C2orf16Q68DN1 1984 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms