RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 TCP11Q8WWU5 503 aa24.68■■□□□ 1.54
HDLBP-220ENST00000442730 MTRQ99707 1265 aa24.68■■□□□ 1.54
HDLBP-220ENST00000442730 PLVAPQ9BX97 442 aa24.68■■□□□ 1.54
HDLBP-220ENST00000442730 TUFT1Q9NNX1 390 aa24.68■■□□□ 1.54
HDLBP-220ENST00000442730 TBKBP1A7MCY6 615 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 MED24O75448 989 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 RARRES1P49788 294 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 TIGD5Q53EQ6 642 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 FERMT3Q86UX7 667 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 CATSPER3Q86XQ3 398 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 ECHDC2Q86YB7 292 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 PIGOQ8TEQ8 1089 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 CCDC43Q96MW1 224 aaKnown RBP24.67■■□□□ 1.54
HDLBP-220ENST00000442730 ASB2Q96Q27 587 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 POLR3CQ9BUI4 534 aaPredicted RBP24.67■■□□□ 1.54
HDLBP-220ENST00000442730 INO80BQ9C086 356 aaPredicted RBP24.67■■□□□ 1.54
HDLBP-220ENST00000442730 CHST12Q9NRB3 414 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 RNF19AQ9NV58 838 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 PCDHB6Q9Y5E3 794 aa24.67■■□□□ 1.54
HDLBP-220ENST00000442730 FNDC1Q4ZHG4 1894 aaPredicted RBP24.66■■□□□ 1.54
HDLBP-220ENST00000442730 GRM6O15303 877 aa24.66■■□□□ 1.54
HDLBP-220ENST00000442730 DGAT1O75907 488 aa24.66■■□□□ 1.54
HDLBP-220ENST00000442730 FXR2P51116 673 aaKnown RBP eCLIP24.66■■□□□ 1.544e-12■□□□□ 10.5
HDLBP-220ENST00000442730 MRPS5P82675 430 aaKnown RBP24.66■■□□□ 1.54
HDLBP-220ENST00000442730 TFF2Q03403 129 aa24.66■■□□□ 1.54
HDLBP-220ENST00000442730 DACT1Q9NYF0 836 aa24.66■■□□□ 1.54
HDLBP-220ENST00000442730 SMC3Q9UQE7 1217 aa24.66■■□□□ 1.54
HDLBP-220ENST00000442730 PIN4Q9Y237 131 aaKnown RBP24.66■■□□□ 1.54
HDLBP-220ENST00000442730 A0A087WWV3 80 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 A0A0U1RQF3 1178 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 SRGAP2CP0DJJ0 459 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 ATF7P17544 494 aaPredicted RBP24.65■■□□□ 1.54
HDLBP-220ENST00000442730 MCTP1Q6DN14 999 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 POTEGQ6S5H5 508 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 CATSPER4Q7RTX7 472 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 ZNF598Q86UK7 904 aaKnown RBP24.65■■□□□ 1.54
HDLBP-220ENST00000442730 ERMNQ8TAM6 284 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 P2RX5Q93086 422 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 TRAIPQ9BWF2 469 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 TMEM117Q9H0C3 514 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 MINDY3Q9H8M7 445 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 HCSTQ9UBK5 93 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 COG5Q9UP83 839 aa24.65■■□□□ 1.54
HDLBP-220ENST00000442730 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.65■■□□□ 1.54
HDLBP-220ENST00000442730 HOXA2O43364 376 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 XRCC6P12956 609 aaKnown RBP eCLIP24.64■■□□□ 1.54
HDLBP-220ENST00000442730 RPA1P27694 616 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 PTGDRQ13258 359 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 SRGAP1Q7Z6B7 1085 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 RNF149Q8NC42 400 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 RNF169Q8NCN4 708 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 HLA-CQ95604 372 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 LMAN2LQ9H0V9 348 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 AGPAT5Q9NUQ2 364 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 PLAGL2Q9UPG8 496 aa24.64■■□□□ 1.54
HDLBP-220ENST00000442730 ATG2AQ2TAZ0 1938 aa24.64■■□□□ 1.53
HDLBP-220ENST00000442730 BRWD1Q9NSI6 2320 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 H3BQV1 296 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 ASAP2O43150 1006 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 MXD4Q14582 209 aaPredicted RBP24.63■■□□□ 1.53
HDLBP-220ENST00000442730 NAALADL2Q58DX5 795 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 CLLU1OSQ5K130 101 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 HAUS3Q68CZ6 603 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 ASAP3Q8TDY4 903 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 CASD1Q96PB1 797 aa24.63■■□□□ 1.53
HDLBP-220ENST00000442730 ALG13Q9NP73 1137 aaKnown RBP24.63■■□□□ 1.53
HDLBP-220ENST00000442730 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.63■■□□□ 1.53
HDLBP-220ENST00000442730 TYW1Q9NV66 732 aaKnown RBP24.63■■□□□ 1.53
HDLBP-220ENST00000442730 DBR1Q9UK59 544 aaKnown RBP24.63■■□□□ 1.53
HDLBP-220ENST00000442730 USO1O60763 962 aaKnown RBP24.62■■□□□ 1.53
HDLBP-220ENST00000442730 ITGB1P05556 798 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 ARL2P36404 184 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 PHKA2P46019 1235 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 CUL4AQ13619 759 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 RILPL1Q5EBL4 403 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 TWF2Q6IBS0 349 aaKnown RBP24.62■■□□□ 1.53
HDLBP-220ENST00000442730 IGSF22Q8N9C0 903 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 KLHL23Q8NBE8 558 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 NACC1Q96RE7 527 aa24.62■■□□□ 1.53
HDLBP-220ENST00000442730 NSUN3Q9H649 340 aaKnown RBP24.62■■□□□ 1.53
HDLBP-220ENST00000442730 LAD1O00515 517 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 EOMESO95936 686 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 CAPSQ13938 189 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 CAMK1Q14012 370 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 TCEAL5Q5H9L2 206 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 LRRC43Q8N309 656 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 SYMPKQ92797 1274 aaKnown RBP24.61■■□□□ 1.53
HDLBP-220ENST00000442730 POLR3FQ9H1D9 316 aaPredicted RBP24.61■■□□□ 1.53
HDLBP-220ENST00000442730 CWH43Q9H720 699 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 LRWD1Q9UFC0 647 aa24.61■■□□□ 1.53
HDLBP-220ENST00000442730 GLRA2P23416 452 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 DNAJB1P25685 340 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 KCNQ1P51787 676 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 PTENP60484 403 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 TFDP1Q14186 410 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 IL17AQ16552 155 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 AAK1Q2M2I8 961 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 SPOUT1Q5T280 376 aaKnown RBP24.6■■□□□ 1.53
HDLBP-220ENST00000442730 LRRC55Q6ZSA7 311 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 ABI1Q8IZP0 508 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms