RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 MRPL42Q9Y6G3 142 aaKnown RBP8.73□□□□□ -1.01
CD44-211ENST00000442151 STK36Q9NRP7 1315 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 PTPRSQ13332 1948 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 TTC3P53804 2025 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 GPR32O75388 356 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 PSMD10O75832 226 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 P4HBP07237 508 aaKnown RBP8.73□□□□□ -1.01
CD44-211ENST00000442151 ATP4AP20648 1035 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 NDUFV1P49821 464 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 PRKCEQ02156 737 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 ADAM15Q13444 863 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 TOB2Q14106 344 aaPredicted RBP8.73□□□□□ -1.01
CD44-211ENST00000442151 GIT2Q14161 759 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 PAN2Q504Q3 1202 aaKnown RBP8.73□□□□□ -1.01
CD44-211ENST00000442151 NEK8Q86SG6 692 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 ADHFE1Q8IWW8 467 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 THNSL1Q8IYQ7 743 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 EFHBQ8N7U6 833 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 POF1BQ8WVV4 589 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 TCP11Q8WWU5 503 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 PGBD4Q96DM1 585 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 OSMRQ99650 979 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 OSBPL7Q9BZF2 842 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 TMX1Q9H3N1 280 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 IGFLR1Q9H665 355 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 TLE6Q9H808 572 aa8.73□□□□□ -1.01
CD44-211ENST00000442151 CHMP2AO43633 222 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 PFKFB2O60825 505 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 VTNP04004 478 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 IBSPP21815 317 aaPredicted RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 RFC5P40937 340 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 QARSP47897 775 aaKnown RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 RAB27AP51159 221 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 PLCB3Q01970 1234 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 HYAL1Q12794 435 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 PCBP1Q15365 356 aaKnown RBP eCLIP8.72□□□□□ -1.01
CD44-211ENST00000442151 TMEM266Q2M3C6 531 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 CTC1Q2NKJ3 1217 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 TRMT1LQ7Z2T5 733 aaKnown RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 SPRED2Q7Z698 418 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 FAM228AQ86W67 206 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 CRIPAKQ8N1N5 446 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 LRRC43Q8N309 656 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 RASGRP4Q8TDF6 673 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 FAM122AQ96E09 287 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 MBOAT7Q96N66 472 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 ZNF558Q96NG5 402 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 NECAB3Q96P71 396 aaPredicted RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 KCNH6Q9H252 994 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 UNC45AQ9H3U1 944 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
CD44-211ENST00000442151 SEPT9Q9UHD8 586 aaPredicted RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 MYH9P35579 1960 aaKnown RBP8.72□□□□□ -1.01
CD44-211ENST00000442151 A0A0U1RQF3 1178 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 ZBTB42B2RXF5 422 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 FGF18O76093 207 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 ITGB1P05556 798 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 GPC3P51654 580 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 STK3Q13188 491 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 DSC3Q14574 896 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 EPHA7Q15375 998 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 SAFBQ15424 915 aaKnown RBP eCLIP8.71□□□□□ -1.01
CD44-211ENST00000442151 SMAD2Q15796 467 aaKnown RBP8.71□□□□□ -1.01
CD44-211ENST00000442151 LETM2Q2VYF4 491 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 MTERF2Q49AM1 385 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 HACE1Q8IYU2 909 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 COLGALT1Q8NBJ5 622 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 CNNM3Q8NE01 707 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 LINC01599Q8WXQ3 324 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.01
CD44-211ENST00000442151 LENG9Q96B70 501 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 TRAIPQ9BWF2 469 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 ADAMTS10Q9H324 1103 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 ALG13Q9NP73 1137 aaKnown RBP8.71□□□□□ -1.01
CD44-211ENST00000442151 UBN1Q9NPG3 1134 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 SPG21Q9NZD8 308 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 KANSL3Q9P2N6 904 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 SUCLA2Q9P2R7 463 aaPredicted RBP8.71□□□□□ -1.01
CD44-211ENST00000442151 STK24Q9Y6E0 443 aa8.71□□□□□ -1.01
CD44-211ENST00000442151 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.01
CD44-211ENST00000442151 TCF20Q9UGU0 1960 aaKnown RBP8.71□□□□□ -1.02
CD44-211ENST00000442151 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 H3BQ06 376 aaPredicted RBP8.7□□□□□ -1.02
CD44-211ENST00000442151 MBTPS2O43462 519 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 DCXO43602 365 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 MAFO75444 373 aaPredicted RBP8.7□□□□□ -1.02
CD44-211ENST00000442151 HOXB8P17481 243 aaPredicted RBP8.7□□□□□ -1.02
CD44-211ENST00000442151 KRT2P35908 639 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 ALDH7A1P49419 539 aaKnown RBP8.7□□□□□ -1.02
CD44-211ENST00000442151 CLCN3P51790 818 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 COASYQ13057 564 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 PPP2R5CQ13362 524 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 TARBP2Q15633 366 aaKnown RBP8.7□□□□□ -1.02
CD44-211ENST00000442151 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
CD44-211ENST00000442151 SRGAP1Q7Z6B7 1085 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms