RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 CD207Q9UJ71 328 aa18■□□□□ 0.47
ITGB1-207ENST00000439974 FAM86C2PA6NEL3 165 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 EML1O00423 815 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 HOXA2O43364 376 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 ALADP13716 330 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
ITGB1-207ENST00000439974 GCFC2P16383 781 aaKnown RBP17.99■□□□□ 0.47
ITGB1-207ENST00000439974 LAG3P18627 525 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 LARP1BQ659C4 914 aaKnown RBP17.99■□□□□ 0.47
ITGB1-207ENST00000439974 THNSL1Q8IYQ7 743 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 EFHBQ8N7U6 833 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 COLGALT1Q8NBJ5 622 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 NLRP7Q8WX94 980 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 ZNF668Q96K58 619 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-207ENST00000439974 NIFKQ9BYG3 293 aaKnown RBP17.99■□□□□ 0.47
ITGB1-207ENST00000439974 TMEM117Q9H0C3 514 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 TMEM60Q9H2L4 133 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 CWH43Q9H720 699 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
ITGB1-207ENST00000439974 C19orf67A6NJJ6 358 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 FGF18O76093 207 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 NRIP1P48552 1158 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 MTERF2Q49AM1 385 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 MICAL1Q8TDZ2 1067 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
ITGB1-207ENST00000439974 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 VAV3Q9UKW4 847 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
ITGB1-207ENST00000439974 NEMFO60524 1076 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 STBD1O95210 358 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 TOB1P50616 345 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-207ENST00000439974 CDC42EP1Q00587 391 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 CALCRLQ16602 461 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 TTC38Q5R3I4 469 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 NCAPH2Q6IBW4 605 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 RBM23Q86U06 439 aaKnown RBP17.97■□□□□ 0.47
ITGB1-207ENST00000439974 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 LRRC43Q8N309 656 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 SNX21Q969T3 373 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 MSLNLQ96KJ4 702 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 NAP1L4Q99733 375 aaKnown RBP17.97■□□□□ 0.47
ITGB1-207ENST00000439974 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 PCDHGC5Q9Y5F6 944 aa17.97■□□□□ 0.47
ITGB1-207ENST00000439974 C5orf42Q9H799 3197 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-207ENST00000439974 TMEM150BA6NC51 233 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 DCXO43602 365 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 EYA4O95677 639 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.47
ITGB1-207ENST00000439974 TXKP42681 527 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 DNM2P50570 870 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 PSMC5P62195 406 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 DRP2Q13474 957 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 PDE12Q6L8Q7 609 aaKnown RBP17.96■□□□□ 0.47
ITGB1-207ENST00000439974 FERMT3Q86UX7 667 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 FAM20AQ96MK3 541 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 GCOM2Q9BZD3 368 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-207ENST00000439974 TLE6Q9H808 572 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 CLEC1BQ9P126 229 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 LZTS1Q9Y250 596 aa17.96■□□□□ 0.47
ITGB1-207ENST00000439974 IGKV6-21A0A0C4DH24 114 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 DDX11L8A8MPP1 907 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 PRR33A8MZF0 331 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 GLP2RO95838 553 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 FGFR4P22455 802 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 PLA2G5P39877 138 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 ERVFC1P60507 584 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 PLCB3Q01970 1234 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 COASYQ13057 564 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 RNF169Q8NCN4 708 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 SMRP1Q8NCR6 262 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
ITGB1-207ENST00000439974 FAM122AQ96E09 287 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 CDCA3Q99618 268 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-207ENST00000439974 SH2D3AQ9BRG2 576 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
ITGB1-207ENST00000439974 ARIH1Q9Y4X5 557 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-207ENST00000439974 PCDHB6Q9Y5E3 794 aa17.95■□□□□ 0.46
ITGB1-207ENST00000439974 A0A087WZ62 844 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 FSCN2O14926 492 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 BAG4O95429 457 aaKnown RBP17.94■□□□□ 0.46
ITGB1-207ENST00000439974 EOMESO95936 686 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 PPM1AP35813 382 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 PPP2R5CQ13362 524 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 LRRC55Q6ZSA7 311 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
ITGB1-207ENST00000439974 ZNF410Q86VK4 478 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 ZNF558Q96NG5 402 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
ITGB1-207ENST00000439974 JPH2Q9BR39 696 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms