RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 RGL1Q9NZL6 768 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 SCN5AQ14524 2016 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 ZBTB39O15060 712 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 OR52Z1P0C646 297 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 KLRC1P26715 233 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 CCL23P55773 120 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 PSMC5P62195 406 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 IGBP1P78318 339 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 PPFIA1Q13136 1202 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 BFSP2Q13515 415 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 BECN1Q14457 450 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 PDIA5Q14554 519 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 IL17AQ16552 155 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
COPS3-203ENST00000439936 ZNF484Q5JVG2 852 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 MFSD5Q6N075 450 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 RETREG2Q8NC44 543 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 ATP8B4Q8TF62 1192 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 LMBR1Q8WVP7 490 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 WNT8BQ93098 351 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 ZBTB10Q96DT7 871 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 DYDC2Q96IM9 177 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
COPS3-203ENST00000439936 EIF2AK1Q9BQI3 630 aaKnown RBP8.37□□□□□ -1.07
COPS3-203ENST00000439936 ZSCAN16Q9H4T2 348 aaPredicted RBP8.37□□□□□ -1.07
COPS3-203ENST00000439936 WRAP73Q9P2S5 460 aaPredicted RBP8.37□□□□□ -1.07
COPS3-203ENST00000439936 LOXHD1Q8IVV2 1947 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 TET1Q8NFU7 2136 aa8.37□□□□□ -1.07
COPS3-203ENST00000439936 A0A087WWV3 80 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 MBLAC1A4D2B0 266 aaPredicted RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 ZBTB42B2RXF5 422 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 CKBP12277 381 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 FSHRP23945 695 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 BMP8BP34820 402 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 SOX11P35716 441 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 PRPHP41219 470 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 QARSP47897 775 aaKnown RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 EPHB4P54760 987 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 ATP2C1P98194 919 aaPredicted RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 CTTNQ14247 550 aaKnown RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 GPNMBQ14956 572 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 TARBP2Q15633 366 aaKnown RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 XKR3Q5GH77 459 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 ZNF618Q5T7W0 954 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 FOXD4L5Q5VV16 416 aaPredicted RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 C16orf59Q7L2K0 433 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 C4orf19Q8IY42 314 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 TMEM199Q8N511 208 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 FOXD4L4Q8WXT5 416 aaPredicted RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 SCLYQ96I15 445 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 NIFKQ9BYG3 293 aaKnown RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 WNT8AQ9H1J5 351 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 TFIP11Q9UBB9 837 aaKnown RBP8.36□□□□□ -1.07
COPS3-203ENST00000439936 MAP4K5Q9Y4K4 846 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 PCDHA2Q9Y5H9 948 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 CEP290O15078 2479 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
COPS3-203ENST00000439936 TMEM150BA6NC51 233 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RBAK-RBAKDNI3L0D1 243 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 LAD1O00515 517 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 DKC1O60832 514 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-203ENST00000439936 IQCF3P0C7M6 154 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 SPATA31C1P0DKV0 1188 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 CSF2RAP15509 400 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 THPOP40225 353 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 NPEPPSP55786 919 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 PRKCEQ02156 737 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CYP4A11Q02928 519 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RBL2Q08999 1139 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 PKP1Q13835 747 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ANO5Q75V66 913 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 IGSF22Q8N9C0 903 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CAGE1Q8TC20 777 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 DNAJB3Q8WWF6 145 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 GLMNQ92990 594 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 VWCEQ96DN2 955 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 FAM167AQ96KS9 214 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CEP89Q96ST8 783 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 SH2D3AQ9BRG2 576 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 PRO3102Q9H379 93 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ZSWIM4Q9H7M6 989 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 LRWD1Q9UFC0 647 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 TUBE1Q9UJT0 475 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ZDHHC9Q9Y397 364 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 TCHHQ07283 1943 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 COL1A2P08123 1366 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 SMIM35A0A1B0GVV1 85 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms