RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 LXNQ9BS40 222 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 TRAIPQ9BWF2 469 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 IGFLR1Q9H665 355 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 DHX33Q9H6R0 707 aaKnown RBP22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 DACT1Q9NYF0 836 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 PLXNA4Q9HCM2 1894 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 LINC01565O15544 149 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 EOMESO95936 686 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 LAG3P18627 525 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 CLLU1OSQ5K130 101 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 EXOC8Q8IYI6 725 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 SLC7A3Q8WY07 619 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 DYDC2Q96IM9 177 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 INO80BQ9C086 356 aaPredicted RBP22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 ZSWIM4Q9H7M6 989 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 LIMCH1Q9UPQ0 1083 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
NCKIPSD-206ENST00000439518 WNT7AO00755 349 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 TBX10O75333 385 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 SFPQP23246 707 aaKnown RBP eCLIP22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 YWHABP31946 246 aaKnown RBP22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 RFC5P40937 340 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 TRIM29Q14134 588 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 ABI1Q8IZP0 508 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 GJD3Q8N144 294 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 LRRC43Q8N309 656 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 EFHBQ8N7U6 833 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 RNF169Q8NCN4 708 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 NLRP4Q96MN2 994 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 C1QTNF1Q9BXJ1 281 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 EPHX3Q9H6B9 360 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 IFT122Q9HBG6 1241 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 PCDHA12Q9UN75 941 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 FAM50BQ9Y247 325 aa22.72■■□□□ 1.23
NCKIPSD-206ENST00000439518 ZBTB39O15060 712 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 SLITRK3O94933 977 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 FOSBP53539 338 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 POLGP54098 1239 aaPredicted RBP22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 CYP4A11Q02928 519 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 CTTNQ14247 550 aaKnown RBP22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 CALCRLQ16602 461 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 OTUD6AQ7L8S5 288 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 THNSL1Q8IYQ7 743 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 PRPF31Q8WWY3 499 aaKnown RBP22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 HSD17B14Q9BPX1 270 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 TLR9Q9NR96 1032 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 LZTS1Q9Y250 596 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 COL4A3BPQ9Y5P4 624 aa22.71■■□□□ 1.23
NCKIPSD-206ENST00000439518 PHKA2P46019 1235 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 NRIP1P48552 1158 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 ERVFC1P60507 584 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 PLCB3Q01970 1234 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 KCNT2Q6UVM3 1135 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 PSPC1Q8WXF1 523 aaKnown RBP22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 TMEM143Q96AN5 459 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 MSLNLQ96KJ4 702 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 MTMR9Q96QG7 549 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 KIF2CQ99661 725 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 EIF2AK1Q9BQI3 630 aaKnown RBP22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 TTC12Q9H892 705 aaPredicted RBP22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 PRKAG3Q9UGI9 489 aa22.7■■□□□ 1.22
NCKIPSD-206ENST00000439518 FSCN2O14926 492 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 GAS2O43903 313 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 NEMFO60524 1076 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 LYPLA2O95372 231 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 LAMTOR4Q0VGL1 99 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 SMAD2Q15796 467 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 CLUL1Q15846 466 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 PDE12Q6L8Q7 609 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 CATSPER4Q7RTX7 472 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 RBM23Q86U06 439 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 TPH2Q8IWU9 490 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 HELQQ8TDG4 1101 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 MRPS27Q92552 414 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 ZNF558Q96NG5 402 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 LLPHQ9BRT6 129 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 CLEC1BQ9P126 229 aa22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 PIN4Q9Y237 131 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-206ENST00000439518 MBTPS2O43462 519 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 GLP2RO95838 553 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 NDUFV1P49821 464 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 ZP2Q05996 745 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 EMC2Q15006 297 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 XKR9Q5GH70 373 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 TWF2Q6IBS0 349 aaKnown RBP22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 CCDC83Q8IWF9 413 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 MICAL1Q8TDZ2 1067 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 TLE6Q9H808 572 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 MINDY3Q9H8M7 445 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 AGPAT5Q9NUQ2 364 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 CD207Q9UJ71 328 aa22.68■■□□□ 1.22
NCKIPSD-206ENST00000439518 C19orf67A6NJJ6 358 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 PI4K2BG5E9Z4 385 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 ASAP2O43150 1006 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 ZNF623O75123 536 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 EYA4O95677 639 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 SRGAP2CP0DJJ0 459 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 SKIP12755 728 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 COL9A1P20849 921 aa22.67■■□□□ 1.22
NCKIPSD-206ENST00000439518 PPM1AP35813 382 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms