RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 NRIP1P48552 1158 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 DNM2P50570 870 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 ERVFC1P60507 584 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 ZP2Q05996 745 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 C4orf19Q8IY42 314 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 GJD3Q8N144 294 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 EFHBQ8N7U6 833 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 MSLNLQ96KJ4 702 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 CEP170P1Q96L14 293 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 NLRP4Q96MN2 994 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 IFT122Q9HBG6 1241 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 C11orf16Q9NQ32 467 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 AAASQ9NRG9 546 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 CLEC1BQ9P126 229 aa16.12■□□□□ 0.17
ATAD3A-206ENST00000439513 FSCN2O14926 492 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 HOXA2O43364 376 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 MBTPS2O43462 519 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 CDC42EP1Q00587 391 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 CYP4A11Q02928 519 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 UBE3AQ05086 875 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 CTTNQ14247 550 aaKnown RBP16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 RBM23Q86U06 439 aaKnown RBP16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 THNSL1Q8IYQ7 743 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 VN1R2Q8NFZ6 395 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 HELQQ8TDG4 1101 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 C1QTNF1Q9BXJ1 281 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 MINDY3Q9H8M7 445 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 TLR9Q9NR96 1032 aa16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
ATAD3A-206ENST00000439513 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 MARCH6O60337 910 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 DKC1O60832 514 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 SLITRK3O94933 977 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 EOMESO95936 686 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 PHKA2P46019 1235 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 PLCB3Q01970 1234 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 SMAD2Q15796 467 aaKnown RBP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 SLFN12Q8IYM2 578 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 SLC7A3Q8WY07 619 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 KIF2CQ99661 725 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 JPH2Q9BR39 696 aaPredicted RBP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 TRAIPQ9BWF2 469 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 CHST12Q9NRB3 414 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 CD207Q9UJ71 328 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 TRIOO75962 3097 aa16.1■□□□□ 0.17
ATAD3A-206ENST00000439513 PER2O15055 1255 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 EYA4O95677 639 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 SSTR3P32745 418 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 RFC5P40937 340 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 NDUFV1P49821 464 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 SMAD4Q13485 552 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 EMC2Q15006 297 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 CALCRLQ16602 461 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 MRPS27Q92552 414 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 LPPQ93052 612 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 PPP2R3CQ969Q6 453 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 ZNF558Q96NG5 402 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 HSD17B14Q9BPX1 270 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 EIF2AK1Q9BQI3 630 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 TMEM60Q9H2L4 133 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 LZTS1Q9Y250 596 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 PPME1Q9Y570 386 aa16.09■□□□□ 0.17
ATAD3A-206ENST00000439513 FAM86C2PA6NEL3 165 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 BAG4O95429 457 aaKnown RBP16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 GUCY1B3Q02153 619 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 DUSP6Q16828 381 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.16
ATAD3A-206ENST00000439513 SLC39A11Q8N1S5 342 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms