RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PLS1Q14651 629 aa16.68■□□□□ 0.26
APP-208ENST00000439274 RRP1BQ14684 758 aaKnown RBP16.68■□□□□ 0.26
APP-208ENST00000439274 QPCTQ16769 361 aa16.68■□□□□ 0.26
APP-208ENST00000439274 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
APP-208ENST00000439274 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
APP-208ENST00000439274 ARFGAP2Q8N6H7 521 aa16.68■□□□□ 0.26
APP-208ENST00000439274 CTNNBL1Q8WYA6 563 aaPredicted RBP16.68■□□□□ 0.26
APP-208ENST00000439274 SYT11Q9BT88 431 aa16.68■□□□□ 0.26
APP-208ENST00000439274 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
APP-208ENST00000439274 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
APP-208ENST00000439274 COG5Q9UP83 839 aa16.68■□□□□ 0.26
APP-208ENST00000439274 ATP8A1Q9Y2Q0 1164 aa16.68■□□□□ 0.26
APP-208ENST00000439274 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
APP-208ENST00000439274 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
APP-208ENST00000439274 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
APP-208ENST00000439274 CFBP00751 764 aa16.68■□□□□ 0.26
APP-208ENST00000439274 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
APP-208ENST00000439274 MAGOHP61326 146 aaKnown RBP16.68■□□□□ 0.26
APP-208ENST00000439274 KRT71Q3SY84 523 aa16.68■□□□□ 0.26
APP-208ENST00000439274 LRCH2Q5VUJ6 765 aa16.68■□□□□ 0.26
APP-208ENST00000439274 RUFY4Q6ZNE9 571 aa16.68■□□□□ 0.26
APP-208ENST00000439274 SEC14L1Q92503 715 aa16.68■□□□□ 0.26
APP-208ENST00000439274 GLG1Q92896 1179 aa16.68■□□□□ 0.26
APP-208ENST00000439274 MAGOHBQ96A72 148 aaKnown RBP16.68■□□□□ 0.26
APP-208ENST00000439274 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
APP-208ENST00000439274 AGPAT3Q9NRZ7 376 aa16.68■□□□□ 0.26
APP-208ENST00000439274 TMOD4Q9NZQ9 345 aa16.68■□□□□ 0.26
APP-208ENST00000439274 ATP8B3O60423 1300 aa16.68■□□□□ 0.26
APP-208ENST00000439274 H0YHG0 523 aa16.67■□□□□ 0.26
APP-208ENST00000439274 BIRC3Q13489 604 aa16.67■□□□□ 0.26
APP-208ENST00000439274 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
APP-208ENST00000439274 MICALCLQ6ZW33 695 aa16.67■□□□□ 0.26
APP-208ENST00000439274 SPATS2Q86XZ4 545 aaKnown RBP16.67■□□□□ 0.26
APP-208ENST00000439274 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
APP-208ENST00000439274 GMCL1P1Q8NEA9 526 aa16.67■□□□□ 0.26
APP-208ENST00000439274 PRR12Q9ULL5 1215 aa16.67■□□□□ 0.26
APP-208ENST00000439274 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
APP-208ENST00000439274 MCTP2Q6DN12 878 aa16.67■□□□□ 0.26
APP-208ENST00000439274 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
APP-208ENST00000439274 ZNF720Q7Z2F6 126 aa16.67■□□□□ 0.26
APP-208ENST00000439274 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
APP-208ENST00000439274 SLC20A1Q8WUM9 679 aa16.67■□□□□ 0.26
APP-208ENST00000439274 ALG3Q92685 438 aa16.67■□□□□ 0.26
APP-208ENST00000439274 CHORDC1Q9UHD1 332 aaPredicted RBP16.67■□□□□ 0.26
APP-208ENST00000439274 STK24Q9Y6E0 443 aa16.67■□□□□ 0.26
APP-208ENST00000439274 GMNCA6NCL1 334 aa16.66■□□□□ 0.26
APP-208ENST00000439274 FSBPO95073 299 aa16.66■□□□□ 0.26
APP-208ENST00000439274 CYP3A4P08684 503 aa16.66■□□□□ 0.26
APP-208ENST00000439274 TNFAIP3P21580 790 aa16.66■□□□□ 0.26
APP-208ENST00000439274 SUGP1Q8IWZ8 645 aaKnown RBP16.66■□□□□ 0.26
APP-208ENST00000439274 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
APP-208ENST00000439274 FAM114A2Q9NRY5 505 aa16.66■□□□□ 0.26
APP-208ENST00000439274 APEX2Q9UBZ4 518 aa16.66■□□□□ 0.26
APP-208ENST00000439274 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
APP-208ENST00000439274 FOXN3O00409 490 aaPredicted RBP16.66■□□□□ 0.26
APP-208ENST00000439274 TRAPPC3O43617 180 aa16.66■□□□□ 0.26
APP-208ENST00000439274 PSMD10O75832 226 aa16.66■□□□□ 0.26
APP-208ENST00000439274 GUCY2CP25092 1073 aa16.66■□□□□ 0.26
APP-208ENST00000439274 PTENP60484 403 aa16.66■□□□□ 0.26
APP-208ENST00000439274 MYL7Q01449 175 aa16.66■□□□□ 0.26
APP-208ENST00000439274 DR1Q01658 176 aa16.66■□□□□ 0.26
APP-208ENST00000439274 ODR4Q5SWX8 454 aa16.66■□□□□ 0.26
APP-208ENST00000439274 AGBL2Q5U5Z8 902 aa16.66■□□□□ 0.26
APP-208ENST00000439274 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
APP-208ENST00000439274 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
APP-208ENST00000439274 FMO2Q99518 471 aa16.66■□□□□ 0.26
APP-208ENST00000439274 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
APP-208ENST00000439274 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
APP-208ENST00000439274 TISP43B9A030 160 aa16.65■□□□□ 0.26
APP-208ENST00000439274 SHBGP04278 402 aa16.65■□□□□ 0.26
APP-208ENST00000439274 ECE1P42892 770 aa16.65■□□□□ 0.26
APP-208ENST00000439274 IFFO1Q0D2I5 559 aa16.65■□□□□ 0.26
APP-208ENST00000439274 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
APP-208ENST00000439274 KIAA1755Q5JYT7 1200 aa16.65■□□□□ 0.26
APP-208ENST00000439274 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
APP-208ENST00000439274 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
APP-208ENST00000439274 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
APP-208ENST00000439274 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
APP-208ENST00000439274 MDM1Q8TC05 714 aa16.65■□□□□ 0.26
APP-208ENST00000439274 RAPGEF5Q92565 580 aa16.65■□□□□ 0.26
APP-208ENST00000439274 IDI2Q9BXS1 227 aa16.65■□□□□ 0.26
APP-208ENST00000439274 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
APP-208ENST00000439274 TTC7AQ9ULT0 858 aaPredicted RBP16.65■□□□□ 0.26
APP-208ENST00000439274 TMEM110-MUSTN1A8MSY1 372 aa16.65■□□□□ 0.26
APP-208ENST00000439274 MARCKSL1P49006 195 aa16.65■□□□□ 0.26
APP-208ENST00000439274 DLG4P78352 724 aa16.65■□□□□ 0.26
APP-208ENST00000439274 SPRED3Q2MJR0 410 aa16.65■□□□□ 0.26
APP-208ENST00000439274 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
APP-208ENST00000439274 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
APP-208ENST00000439274 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
APP-208ENST00000439274 MKNK1Q9BUB5 465 aa16.65■□□□□ 0.26
APP-208ENST00000439274 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
APP-208ENST00000439274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.26
APP-208ENST00000439274 DMAC2Q9NW81 257 aa16.65■□□□□ 0.26
APP-208ENST00000439274 EXOC3O60645 756 aa16.64■□□□□ 0.25
APP-208ENST00000439274 UBAP2Q5T6F2 1119 aaKnown RBP16.64■□□□□ 0.25
APP-208ENST00000439274 TXLNGYQ9BZA5 131 aa16.64■□□□□ 0.25
APP-208ENST00000439274 PCIF1Q9H4Z3 704 aa16.64■□□□□ 0.25
APP-208ENST00000439274 TDRD3Q9H7E2 651 aaKnown RBP16.64■□□□□ 0.25
APP-208ENST00000439274 SNX24Q9Y343 169 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms