RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CUL5Q93034 780 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 B4E1Z4 1266 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 KLRC1P26715 233 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 SLC26A2P50443 739 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 CRYBB1P53674 252 aaPredicted RBP12.75□□□□□ -0.37
CSTF3-203ENST00000438862 COL9A2Q14055 689 aaPredicted RBP12.75□□□□□ -0.37
CSTF3-203ENST00000438862 DSC3Q14574 896 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 SLC44A3Q8N4M1 653 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
CSTF3-203ENST00000438862 TRAPPC12Q8WVT3 735 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 TMEM40Q8WWA1 233 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 PCYT2Q99447 389 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 KRT23Q9C075 422 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 CACNA1IQ9P0X4 2223 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 FBXO4Q9UKT5 387 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
CSTF3-203ENST00000438862 ATRXP46100 2492 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 PIK3CDO00329 1044 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 CTSAP10619 480 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
CSTF3-203ENST00000438862 STAT5BP51692 787 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 MTMR1Q13613 665 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
CSTF3-203ENST00000438862 KIAA0319LQ8IZA0 1049 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 STAMQ92783 540 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 RNF19AQ9NV58 838 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 PCDHGA2Q9Y5H1 932 aa12.74□□□□□ -0.37
CSTF3-203ENST00000438862 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 ITGB5P18084 799 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 METAP2P50579 478 aaKnown RBP eCLIP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 BCAR1P56945 870 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 PTPN14Q15678 1187 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 USP17L6PQ6QN14 398 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 PJA1Q8NG27 643 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 RSAD2Q8WXG1 361 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 SHDQ96IW2 340 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
CSTF3-203ENST00000438862 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 SLC9A2Q9UBY0 812 aa12.73□□□□□ -0.37
CSTF3-203ENST00000438862 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 NT5C1B-RDH14C9J2C7 533 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 MEIS2O14770 477 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 LAMTOR5O43504 91 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 CYTH3O43739 400 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 HBP1O60381 514 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
CSTF3-203ENST00000438862 STARD6P59095 220 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
CSTF3-203ENST00000438862 GRM4Q14833 912 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 ECHDC2Q86YB7 292 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 USP18Q9UMW8 372 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 EVPLQ92817 2033 aa12.72□□□□□ -0.37
CSTF3-203ENST00000438862 COL1A2P08123 1366 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 GPR179Q6PRD1 2367 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 SALL3Q9BXA9 1300 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 N4BP1O75113 896 aaKnown RBP12.71□□□□□ -0.37
CSTF3-203ENST00000438862 GLULP15104 373 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 TGM1P22735 817 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 KLRC2P26717 231 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 DMWDQ09019 674 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 SEC23AQ15436 765 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 KIZQ2M2Z5 673 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
CSTF3-203ENST00000438862 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 ZNF484Q5JVG2 852 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.37
CSTF3-203ENST00000438862 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
CSTF3-203ENST00000438862 AUTS2Q8WXX7 1259 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 OSMRQ99650 979 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms