RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 FAM204AQ9H8W3 233 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 DGAT1O75907 488 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 MYCP01106 439 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 PAK2Q13177 524 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 NAA25Q14CX7 972 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 Q3C1V9 767 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 MUM1L1Q5H9M0 696 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 SYTL5Q8TDW5 730 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 MAP2K7O14733 419 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 MAFGO15525 162 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 PSMC6P62333 389 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 LLGL1Q15334 1064 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM49AQ9H0Q0 323 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 TRIM10Q9UDY6 481 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 EMSYQ7Z589 1322 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 MYO1FO00160 1098 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 KLK7P49862 253 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 DRAP1Q14919 205 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 Q4G0T1 1027 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 CDKAL1Q5VV42 579 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 TCP11Q8WWU5 503 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 RRP15Q9Y3B9 282 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 SPEF2Q9C093 1822 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 PMS1P54277 932 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 MEIS2O14770 477 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 GNGT1P63211 74 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 IL17AQ16552 155 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 PDXDC1Q6P996 788 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 KCNK18Q7Z418 384 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
TRAPPC9-202ENST00000438773 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 KIF4AO95239 1232 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 CD58P19256 250 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 COPB2P35606 906 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 XRRA1Q6P2D8 792 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 CHST13Q8NET6 341 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 CAPN7Q9Y6W3 813 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SOCS7O14512 581 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 ACTN1P12814 892 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 PRKCEQ02156 737 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 APTXQ7Z2E3 356 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 THAP12O43422 761 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 PLS3P13797 630 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SNAPC2Q13487 334 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 GIT2Q14161 759 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SRLQ86TD4 932 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 GSPT2Q8IYD1 628 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 KIAA0895Q8NCT3 520 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SRGAP2O75044 1071 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLC9A1P19634 815 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 INTS2Q9H0H0 1204 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-202ENST00000438773 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 EPHX2P34913 555 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 CASP8Q14790 479 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 GPC2Q8N158 579 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 HAS1Q92839 578 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM81BQ96LP2 452 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 ERGIC2Q96RQ1 377 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 SYNPO2Q9UMS6 1093 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 L1RE1Q9UN81 338 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms