RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 KLHL30Q0D2K2 578 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PPIL2Q13356 520 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 ZC2HC1CQ53FD0 456 aaPredicted RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 XRRA1Q6P2D8 792 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 ARMC9Q7Z3E5 817 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 MYCT1Q8N699 235 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 NACC1Q96RE7 527 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 OSBPL9Q96SU4 736 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 NUCKS1Q9H1E3 243 aaKnown RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 A0A087X0T9 212 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PDXKO00764 312 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 FAM13AO94988 1023 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 FAM228BP0C875 321 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 MATR3P43243 847 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 SYN2Q92777 582 aaPredicted RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PACSIN1Q9BY11 444 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 GBP3Q9H0R5 595 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 TYW1Q9NV66 732 aaKnown RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 KCNH4Q9UQ05 1017 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 PJA2O43164 708 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 AFPP02771 609 aaKnown RBP15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 TTC31Q49AM3 519 aaPredicted RBP15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 FRMD5Q7Z6J6 570 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 CHST13Q8NET6 341 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 RBAK-RBAKDNI3L0D1 243 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 UCHL3P15374 230 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 CORO7P57737 925 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 ASIC2Q16515 512 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 EXOC3L4Q17RC7 722 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 C1orf186Q6ZWK4 172 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 SPAG5Q96R06 1193 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 ZNF408Q9H9D4 720 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 HPCAL4Q9UM19 191 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
PTCHD3-201ENST00000438700 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 EPB41P11171 864 aaKnown RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 KLRC1P26715 233 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 GGCXP38435 758 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 SLC18A3Q16572 532 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 ICE2Q659A1 982 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 MAP1SQ66K74 1059 aaPredicted RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 DNAAF5Q86Y56 855 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 ANKRD35Q8N283 1001 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 GPRASP2Q96D09 838 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 HYOU1Q9Y4L1 999 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 DOCK5Q9H7D0 1870 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 TGFB1I1O43294 461 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 RGS20O76081 388 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 CCNE2O96020 404 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 TUBBP07437 444 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 PON1P27169 355 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 GTF2A1P52655 376 aaPredicted RBP15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 KIAA0753Q2KHM9 967 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 KLHDC7AQ5VTJ3 777 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 RIOX2Q8IUF8 465 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 AFAP1L1Q8TED9 768 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 TLR10Q9BXR5 811 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 SPATC1LQ9H0A9 340 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 AIPL1Q9NZN9 384 aa15.13■□□□□ 0.01
PTCHD3-201ENST00000438700 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 FTCDO95954 541 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 RPL13P26373 211 aaKnown RBP15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 CNTN2Q02246 1040 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 PTK2Q05397 1052 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 MOGSQ13724 837 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 BMT2Q1RMZ1 405 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 HDAC7Q8WUI4 952 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 PARVGQ9HBI0 331 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 GCNT4Q9P109 453 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 TCEAL9Q9UHQ7 104 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 PACSIN2Q9UNF0 486 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 MYH11P35749 1972 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 ARHGEF35A5YM69 484 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 AGPSO00116 658 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 PALMO75781 387 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 GJA5P36382 358 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 LDLRAD1Q5T700 205 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 IQCEQ6IPM2 695 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 GJB7Q6PEY0 223 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 NCAPG2Q86XI2 1143 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 GOLGA6L1Q8N7Z2 621 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms