RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NCDNQ9UBB6 729 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 PCSK5Q92824 1860 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 DAPK3O43293 454 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 JUNP05412 331 aaKnown RBP5□□□□□ -1.61
HMGB1P31-201ENST00000437242 KCNA6P17658 529 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 RBM25P49756 843 aaKnown RBP5□□□□□ -1.61
HMGB1P31-201ENST00000437242 COL10A1Q03692 680 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 LRP10Q7Z4F1 713 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 DDX53Q86TM3 631 aaKnown RBP5□□□□□ -1.61
HMGB1P31-201ENST00000437242 RPGRQ92834 1020 aaKnown RBP5□□□□□ -1.61
HMGB1P31-201ENST00000437242 LENG9Q96B70 501 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 MNTQ99583 582 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 ACSS2Q9NR19 701 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 SNTG2Q9NY99 539 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 DNAI1Q9UI46 699 aa5□□□□□ -1.61
HMGB1P31-201ENST00000437242 CCDC163A0A0D9SF12 145 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 FAM221BA6H8Z2 402 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 KCNQ2O43526 872 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 RHOBTB3O94955 611 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 GCP02774 474 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 GTF2F1P35269 517 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 SERINC3Q13530 473 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 HTR3DQ70Z44 454 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 CHST14Q8NCH0 376 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 TUBGCP5Q96RT8 1024 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 C14orf93Q9H972 538 aaKnown RBP4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 TRIM39Q9HCM9 518 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 TRPS1Q9UHF7 1281 aa4.99□□□□□ -1.61
HMGB1P31-201ENST00000437242 B4E1Z4 1266 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 M0R2C6 588 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 PPFIA4O75335 1185 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 ABHD16AO95870 558 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 GNAT2P19087 354 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 MECP2P51608 486 aaKnown RBP4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 NPEPPSP55786 919 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 BCAR1P56945 870 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 SPIDRQ14159 915 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 PTPAQ15257 358 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 LY6G5CQ5SRR4 150 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 MBNL2Q5VZF2 373 aaKnown RBP4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 KCNV1Q6PIU1 500 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 PROKR1Q8TCW9 393 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 VOPP1Q96AW1 172 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 DNAJC7Q99615 494 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 IGSF5Q9NSI5 407 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 SYNPO2Q9UMS6 1093 aa4.98□□□□□ -1.61
HMGB1P31-201ENST00000437242 H7C1D1 291 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 DVL2O14641 736 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 GLRX3O76003 335 aaKnown RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 NUDT3O95989 172 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 CYP17A1P05093 508 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 HNRNPLP14866 589 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 ADRA1BP35368 520 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 RANGAP1P46060 587 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZNF174Q15697 407 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 DCAF17Q5H9S7 520 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 C1QL3Q5VWW1 255 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZCCHC8Q6NZY4 707 aaKnown RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 LRRC55Q6ZSA7 311 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 RHOUQ7L0Q8 258 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 NME9Q86XW9 330 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 VRK3Q8IV63 474 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 CMTM4Q8IZR5 234 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 THAP3Q8WTV1 239 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 ST8SIA2Q92186 375 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 MLST8Q9BVC4 326 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 HAPLN2Q9GZV7 340 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 NCOA5Q9HCD5 579 aaKnown RBP4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 SAMD15Q9P1V8 674 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 FZD1Q9UP38 647 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 SORCS3Q9UPU3 1222 aa4.97□□□□□ -1.61
HMGB1P31-201ENST00000437242 MAFGO15525 162 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 LMNAP02545 664 aaKnown RBP4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 ITGB1P05556 798 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 PROZP22891 400 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 KIR2DL3P43628 341 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 MYBPC3Q14896 1274 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 EPHA7Q15375 998 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 NAIF1Q69YI7 327 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 KIAA1958Q8N8K9 716 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 CPT1CQ8TCG5 803 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 C16orf92Q96LL3 132 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 FAM193BQ96PV7 902 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 CABP5Q9NP86 173 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 PTCH2Q9Y6C5 1203 aa4.96□□□□□ -1.62
HMGB1P31-201ENST00000437242 PTPDC1A2A3K4 754 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 GRXCR1A8MXD5 290 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 MTSS1O43312 755 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 RECQL4O94761 1208 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 GYPEP15421 78 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 HK1P19367 917 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 IGFALSP35858 605 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 C2orf27AQ580R0 203 aa4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 APBB1IPQ7Z5R6 666 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P31-201ENST00000437242 C7orf31Q8N865 590 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms