RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 PCDHGA2Q9Y5H1 932 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 CLUHO75153 1309 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 B4GALT3O60512 393 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 LILRB3O75022 631 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 LILRB5O75023 590 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 CCNE2O96020 404 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 GALTP07902 379 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 KLRC2P26717 231 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 COL9A3Q14050 684 aaPredicted RBP18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZNF484Q5JVG2 852 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 NXPE3Q969Y0 559 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 DSCC1Q9BVC3 393 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 ADAMTS10Q9H324 1103 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 NRDE2Q9H7Z3 1164 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 SLC2A4RGQ9NR83 387 aa18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 SPATA6Q9NWH7 488 aaPredicted RBP18.62■□□□□ 0.57
HMGN1P19-201ENST00000436976 CSTF1Q05048 431 aaKnown RBP18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 CWC27Q6UX04 472 aaKnown RBP18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 ABHD15Q6UXT9 468 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 NELL1Q92832 810 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZNF668Q96K58 619 aaPredicted RBP18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 MXRA8Q9BRK3 442 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 SDF4Q9BRK5 362 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 PSTPIP2Q9H939 334 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 MAN1C1Q9NR34 630 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 DNAJB4Q9UDY4 337 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 PCDHA6Q9UN73 950 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 MTF2Q9Y483 593 aaPredicted RBP18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 PCDHA8Q9Y5H6 950 aa18.61■□□□□ 0.57
HMGN1P19-201ENST00000436976 CCDC195A0A1B0GUA6 201 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 ANHXE9PGG2 379 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 LAMTOR5O43504 91 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 SSBP05455 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 FGFR4P22455 802 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 CLCN3P51790 818 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 NLRP11P59045 1033 aaKnown RBP18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 HTR4Q13639 388 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 METTL13Q8N6R0 699 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 ATRIPQ8WXE1 791 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 STAMQ92783 540 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 RPP25Q9BUL9 199 aaKnown RBP18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 DDX23Q9BUQ8 820 aaKnown RBP18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 TBC1D13Q9NVG8 400 aa18.6■□□□□ 0.57
HMGN1P19-201ENST00000436976 BACH1O14867 736 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 INPPL1O15357 1258 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 RFPL2O75678 378 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 MYBP10242 640 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 EIF4BP23588 611 aaKnown RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 SLC11A1P49279 550 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 LINC01465Q8N7H1 131 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 LPPQ93052 612 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZNF707Q96C28 371 aaPredicted RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 RRP36Q96EU6 259 aaKnown RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 EMILIN2Q9BXX0 1053 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 RHOBTB2Q9BYZ6 727 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZSCAN32Q9NX65 697 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 NUMBLQ9Y6R0 609 aa18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 TDRD15B5MCY1 1934 aaKnown RBP18.59■□□□□ 0.57
HMGN1P19-201ENST00000436976 NOTCH4Q99466 2003 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 KANSL1LA0AUZ9 987 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 SPDYE3A6NKU9 549 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 MEIS3P2A8K0S8 358 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 DDX39AO00148 427 aaKnown RBP18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 SLC30A4O14863 429 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 LAMP2P13473 410 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 PDXDC2PQ6P474 469 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 TSSK4Q6SA08 328 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 BBXQ8WY36 941 aaPredicted RBP18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 ZNF302Q9NR11 478 aa18.58■□□□□ 0.56
HMGN1P19-201ENST00000436976 GPC5P78333 572 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 SNW1Q13573 536 aaKnown RBP18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 LONRF3Q496Y0 759 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 FAM160B1Q5W0V3 765 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 BCO2Q9BYV7 579 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 IL25Q9H293 177 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 AKT3Q9Y243 479 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 F5P12259 2224 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 GREB1Q4ZG55 1949 aa18.57■□□□□ 0.56
HMGN1P19-201ENST00000436976 PAPLNO95428 1278 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 SPEM2Q0P670 501 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 SWSAP1Q6NVH7 229 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 CYP26C1Q6V0L0 522 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 TRMT1LQ7Z2T5 733 aaKnown RBP18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 ZNF280BQ86YH2 543 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 LRRC71Q8N4P6 559 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 NETO1Q8TDF5 533 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 SMG7Q92540 1137 aaKnown RBP18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 MYL10Q9BUA6 226 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 GBP3Q9H0R5 595 aa18.56■□□□□ 0.56
HMGN1P19-201ENST00000436976 SDK1Q7Z5N4 2213 aa18.55■□□□□ 0.56
HMGN1P19-201ENST00000436976 IGF2RP11717 2491 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms