RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TBCKQ8TEA7 893 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZNF668Q96K58 619 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MRPL9Q9BYD2 267 aaKnown RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CHST12Q9NRB3 414 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SPG21Q9NZD8 308 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PUF60Q9UHX1 559 aaKnown RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TMEM150BA6NC51 233 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 FGFR4P22455 802 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PSMA5P28066 241 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PHKA2P46019 1235 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CDC42EP1Q00587 391 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KRT17Q04695 432 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TCF15Q12870 199 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 XKR3Q5GH77 459 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZNF410Q86VK4 478 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 FBXL6Q8N531 539 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 HELQQ8TDG4 1101 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CASP10Q92851 521 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZBP1Q9H171 429 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CDH22Q9UJ99 828 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 IRAK3Q9Y616 596 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CACNA1HO95180 2353 aa12.33□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MAFO75444 373 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CSDE1O75534 798 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 REC8O95072 547 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PTPN5P54829 565 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 BCAR1P56945 870 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NLRP5P59047 1200 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ANO5Q75V66 913 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PRRX2Q99811 253 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 GCOM2Q9BZD3 368 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ADAM7Q9H2U9 754 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MEIS3P2A8K0S8 358 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SLC37A4O43826 429 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZNF623O75123 536 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DEXIO95424 95 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ITIH3Q06033 890 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PPP2R5CQ13362 524 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MTERF2Q49AM1 385 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 GALNT17Q6IS24 598 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TMC7Q7Z402 723 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 BLIDQ8IZY5 108 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 BCL7CQ8WUZ0 217 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SCLT1Q96NL6 688 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NECTIN4Q96NY8 510 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 IFT122Q9HBG6 1241 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 EVPLQ92817 2033 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MYO15AQ9UKN7 3530 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 USP34Q70CQ2 3546 aa12.31□□□□□ -0.44
SPTLC1P4-201ENST00000435997 A0A087WZ62 844 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 EML1O00423 815 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 B4GALT3O60512 393 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZC3H11AO75152 810 aaKnown RBP eCLIP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CTSAP10619 480 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ALDH7A1P49419 539 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 RAB27AP51159 221 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 POLGP54098 1239 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PSMC5P62195 406 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DDX53Q86TM3 631 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 IGSF21Q96ID5 467 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SH2D3AQ9BRG2 576 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms