RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 ZMYND8Q9ULU4 1186 aaPredicted RBP16.98■□□□□ 0.31
CNOT9-205ENST00000433439 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
CNOT9-205ENST00000433439 A0A087WZ62 844 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 MBD3O95983 291 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 GPC3P51654 580 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 CAPSQ13938 189 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 TFDP1Q14186 410 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
CNOT9-205ENST00000433439 ODR4Q5SWX8 454 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 LRRC8DQ7L1W4 858 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 SFR1Q86XK3 245 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 DEPTORQ8TB45 409 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
CNOT9-205ENST00000433439 SCLYQ96I15 445 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 OSMRQ99650 979 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 FDXACB1Q9BRP7 624 aaPredicted RBP16.97■□□□□ 0.31
CNOT9-205ENST00000433439 KIFC3Q9BVG8 833 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 CELF4Q9BZC1 486 aaKnown RBP16.97■□□□□ 0.31
CNOT9-205ENST00000433439 CDHR5Q9HBB8 845 aa16.97■□□□□ 0.31
CNOT9-205ENST00000433439 ASAP2O43150 1006 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 CSDE1O75534 798 aaKnown RBP16.96■□□□□ 0.31
CNOT9-205ENST00000433439 CHRNA1P02708 482 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 RPLP2P05387 115 aaKnown RBP16.96■□□□□ 0.31
CNOT9-205ENST00000433439 PLS3P13797 630 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 SELPP16109 830 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 PTMSP20962 102 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.31
CNOT9-205ENST00000433439 PPP2R5AQ15172 486 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 NFKBIBQ15653 356 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 HERC4Q5GLZ8 1057 aaPredicted RBP16.96■□□□□ 0.31
CNOT9-205ENST00000433439 PARVGQ9HBI0 331 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 KMT5AQ9NQR1 393 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 LARSQ9P2J5 1176 aaKnown RBP16.96■□□□□ 0.31
CNOT9-205ENST00000433439 MYH11P35749 1972 aa16.96■□□□□ 0.31
CNOT9-205ENST00000433439 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 SLC16A4O15374 487 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 GPR32O75388 356 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 PHKA2P46019 1235 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 NPTX2P47972 431 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 DPYDQ12882 1025 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 COASYQ13057 564 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 RPAINQ86UA6 219 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
CNOT9-205ENST00000433439 GCOM2Q9BZD3 368 aaPredicted RBP16.95■□□□□ 0.3
CNOT9-205ENST00000433439 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 ADAMTS10Q9H324 1103 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 EXOC1Q9NV70 894 aa16.95■□□□□ 0.3
CNOT9-205ENST00000433439 K7ENM7 598 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 TRAK2O60296 914 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 CAND2O75155 1236 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 TIMP1P01033 207 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 RPN1P04843 607 aaKnown RBP16.94■□□□□ 0.3
CNOT9-205ENST00000433439 IQCF3P0C7M6 154 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 GHRP10912 638 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 GAP43P17677 238 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 FGFR4P22455 802 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 ITGB8P26012 769 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 NAMPTP43490 491 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 CRYBB1P53674 252 aaPredicted RBP16.94■□□□□ 0.3
CNOT9-205ENST00000433439 SMTNP53814 917 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
CNOT9-205ENST00000433439 MGAT3Q09327 533 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 KMT5BQ4FZB7 885 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 ZNF410Q86VK4 478 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 ZBTB8OSQ8IWT0 167 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 FAM178BQ8IXR5 827 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 SMARCE1Q969G3 411 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 CLSTN2Q9H4D0 955 aa16.94■□□□□ 0.3
CNOT9-205ENST00000433439 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
CNOT9-205ENST00000433439 INO80B-WBP1J3KQ70 363 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 SMC2O95347 1197 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 MYL1P05976 194 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
CNOT9-205ENST00000433439 ZNF131P52739 623 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 RBL2Q08999 1139 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 FAM26DQ5JW98 314 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 DEFB128Q7Z7B8 93 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 TMEM40Q8WWA1 233 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 INO80BQ9C086 356 aaPredicted RBP16.93■□□□□ 0.3
CNOT9-205ENST00000433439 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 NR2E3Q9Y5X4 410 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 ADGRA3Q8IWK6 1321 aa16.93■□□□□ 0.3
CNOT9-205ENST00000433439 PVALEFA0A1B0GWK0 134 aa16.92■□□□□ 0.3
CNOT9-205ENST00000433439 KLRC4O43908 158 aa16.92■□□□□ 0.3
CNOT9-205ENST00000433439 RPS6KA5O75582 802 aa16.92■□□□□ 0.3
CNOT9-205ENST00000433439 GCNT3O95395 438 aa16.92■□□□□ 0.3
CNOT9-205ENST00000433439 DARSP14868 501 aaKnown RBP16.92■□□□□ 0.3
CNOT9-205ENST00000433439 EIF4BP23588 611 aaKnown RBP16.92■□□□□ 0.3
CNOT9-205ENST00000433439 PTENP60484 403 aa16.92■□□□□ 0.3
CNOT9-205ENST00000433439 NFX1Q12986 1120 aaKnown RBP16.92■□□□□ 0.3
CNOT9-205ENST00000433439 TMEM132AQ24JP5 1023 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms