RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZNF274Q96GC6 653 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-205ENST00000431889 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
SMARCE1-205ENST00000431889 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.16
SMARCE1-205ENST00000431889 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.16
SMARCE1-205ENST00000431889 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
SMARCE1-205ENST00000431889 ZBTB39O15060 712 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 COASYQ13057 564 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 PIK3AP1Q6ZUJ8 805 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 LRRC43Q8N309 656 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 POP1Q99575 1024 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 PIN4Q9Y237 131 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-205ENST00000431889 CYP3A7-CYP3A51PA0A087WV96 503 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 CYP3A7P24462 503 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 BCAR1P56945 870 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 UBE3AQ05086 875 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 XKR3Q5GH77 459 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 TWF2Q6IBS0 349 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 ALYREFQ86V81 257 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 TMEM143Q96AN5 459 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 NIFKQ9BYG3 293 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 A0A087WWV3 80 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 A0A0U1RQF3 1178 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCE1-205ENST00000431889 CTDNEP1O95476 244 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 SRGAP2CP0DJJ0 459 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 NCAPH2Q6IBW4 605 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 SPG21Q9NZD8 308 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 RGL1Q9NZL6 768 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
SMARCE1-205ENST00000431889 VAV3Q9UKW4 847 aa16■□□□□ 0.15
SMARCE1-205ENST00000431889 TECTAO75443 2155 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 LOC730098B7Z3J9 87 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 LARGE1O95461 756 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 PHKA2P46019 1235 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 AFF1P51825 1210 aaKnown RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 PLCB3Q01970 1234 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 CYP4A11Q02928 519 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 NR5A1Q13285 461 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 CTTNQ14247 550 aaKnown RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 HERC4Q5GLZ8 1057 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 CPLX2Q6PUV4 134 aaKnown RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 C12orf76Q8N812 135 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 BCL7CQ8WUZ0 217 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 FBXL18Q96ME1 805 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 MBOAT7Q96N66 472 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 DNAJB4Q9UDY4 337 aa15.99■□□□□ 0.15
SMARCE1-205ENST00000431889 MUC6Q6W4X9 2439 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 IGKV6-21A0A0C4DH24 114 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 HOXA2O43364 376 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 MARCH6O60337 910 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 B4GALT3O60512 393 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 DNM2P50570 870 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 PSMC5P62195 406 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 KRT17Q04695 432 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 ANKRD54Q6NXT1 300 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 CATSPER4Q7RTX7 472 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 HAS1Q92839 578 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 DYDC2Q96IM9 177 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 CEP170P1Q96L14 293 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 TM6SF1Q9BZW5 370 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 S1PR5Q9H228 398 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 MINDY3Q9H8M7 445 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
SMARCE1-205ENST00000431889 CXCL14O95715 111 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 SSBP05455 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 MYBP10242 640 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 AK2P54819 239 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 KCNC3Q14003 757 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 IER5LQ5T953 404 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 NEK8Q86SG6 692 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 RDM1Q8NG50 284 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 EDAQ92838 391 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 PHF7Q9BWX1 381 aaPredicted RBP15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 C22orf23Q9BZE7 217 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 FAM105AQ9NUU6 356 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 ARID2Q68CP9 1835 aa15.97■□□□□ 0.15
SMARCE1-205ENST00000431889 TMEM221A6NGB7 291 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 C2orf71A6NGG8 1288 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 M0R296 226 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 WNT7AO00755 349 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 CLASP2O75122 1294 aaKnown RBP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 SFPQP23246 707 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 QARSP47897 775 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms