RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 MOGSQ13724 837 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SNX17Q15036 470 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SMC5Q8IY18 1101 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 LRRC71Q8N4P6 559 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 TBCKQ8TEA7 893 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 LMBR1Q8WVP7 490 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MRPS27Q92552 414 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 KIFAP3Q92845 792 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 TSG101Q99816 390 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PCDHA2Q9Y5H9 948 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ROBO3Q96MS0 1386 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SPEF2Q9C093 1822 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SPATA31C2B4DYI2 1134 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PRPF3O43395 683 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ATG13O75143 517 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 DGAT1O75907 488 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF568Q3ZCX4 644 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 HELQQ8TDG4 1101 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF668Q96K58 619 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SPACA7Q96KW9 195 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ARID3AQ99856 593 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SIPA1L3O60292 1781 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 NFASCO94856 1347 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 CLCN3P51790 818 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MYO1EQ12965 1108 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 EPHA7Q15375 998 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SURF1Q15526 300 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MTHFD1LQ6UB35 978 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF589Q86UQ0 364 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 TRIM50Q86XT4 487 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ADHFE1Q8IWW8 467 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 STAG2Q8N3U4 1231 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF560Q96MR9 790 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MRPL4Q9BYD3 311 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 IGSF9Q9P2J2 1179 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 GDAQ9Y2T3 454 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MYH2Q9UKX2 1941 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 PLIN4Q96Q06 1357 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 RFXAPO00287 272 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 MYL4P12829 197 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 EIF4BP23588 611 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ARHGAP1Q07960 439 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 LEXMQ3ZCV2 418 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 POTEEQ6S8J3 1075 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 PHF20Q9BVI0 1012 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SNX25Q9H3E2 840 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ICAM3P32942 547 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 AASDHQ4L235 1098 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 APOA5Q6Q788 366 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ALYREFQ86V81 257 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 CMTR1Q8N1G2 835 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ANP32BQ92688 251 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 P2RX5Q93086 422 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 TCEANC2Q96MN5 208 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 POLR3FQ9H1D9 316 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 RBM19Q9Y4C8 960 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 LINC01553A4QN01 128 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 THP07101 528 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 AVPR1AP37288 418 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 TAP1Q03518 808 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 STOX1Q6ZVD7 989 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 HDDC3Q8N4P3 179 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 FBXL6Q8N531 539 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 MYCT1Q8N699 235 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 KLHL23Q8NBE8 558 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 PI4K2BQ8TCG2 481 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 PPP1R13LQ8WUF5 828 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 UCMAQ8WVF2 138 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 E2F7Q96AV8 911 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ACAP3Q96P50 834 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 BARHL2Q9NY43 387 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 LSM7Q9UK45 103 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 DNAJC25-GNG10A0A024R161 153 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF263O14978 683 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 GFRA3O60609 400 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 BIRC3Q13489 604 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 EMC2Q15006 297 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 RABEP1Q15276 862 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SERINC5Q86VE9 423 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 CCDC65Q8IXS2 484 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 DDX1Q92499 740 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 ANKRD36BP1Q96IX9 119 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 UROC1Q96N76 676 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SORCS3Q9UPU3 1222 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 GNEQ9Y223 722 aaKnown RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 TMEM221A6NGB7 291 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 H3BNC9 293 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 M0R296 226 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SOX1O00570 391 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-202ENST00000431736 PRKCBP05771 671 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 FOXK2Q01167 660 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 SLFN12LQ6IEE8 588 aa5.05□□□□□ -1.6
UBE4A-202ENST00000431736 NXPE3Q969Y0 559 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms