RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 MAFO75444 373 aaPredicted RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 DGKIO75912 1065 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 STAG3L1P0CL83 205 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 SPATA31C1P0DKV0 1188 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 MUTP22033 750 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 EIF4BP23588 611 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 RPA1P27694 616 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 SARSP49591 514 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 COL4A6Q14031 1691 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 SLC7A3Q8WY07 619 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 SAMD11Q96NU1 681 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 SRPRBQ9Y5M8 271 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 MRPL42Q9Y6G3 142 aaKnown RBP13.26□□□□□ -0.29
TRERNA1-201ENST00000431460 TRANK1O15050 2925 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 SPTLC2O15270 562 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 SLC26A4O43511 780 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 PPP6R2O75170 966 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 FGFR1P11362 822 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 DARSP14868 501 aaKnown RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 ZSCAN20P17040 1043 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 MARCKSP29966 332 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 TFF2Q03403 129 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 EMC2Q15006 297 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 STK38Q15208 465 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 PIGOQ8TEQ8 1089 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 ZNF689Q96CS4 500 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 GCOM2Q9BZD3 368 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 RGS18Q9NS28 235 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 HCSTQ9UBK5 93 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 FBXO2Q9UK22 296 aaPredicted RBP13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 REV3LO60673 3130 aa13.25□□□□□ -0.29
TRERNA1-201ENST00000431460 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 IGKV6-21A0A0C4DH24 114 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 C9IYK1 514 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 MED24O75448 989 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 POU3F3P20264 500 aaPredicted RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 KRT85P78386 507 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 DSC3Q14574 896 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 SLC24A5Q71RS6 500 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 KCTD17Q8N5Z5 321 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 KCNG4Q8TDN1 519 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 JPH2Q9BR39 696 aaPredicted RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 COL25A1Q9BXS0 654 aaPredicted RBP13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 C1orf112Q9NSG2 853 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 PPME1Q9Y570 386 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 A0A0C4DFX4 3053 aa13.24□□□□□ -0.29
TRERNA1-201ENST00000431460 TTC3P53804 2025 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 H3BNC9 293 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 CDC25AP30304 524 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 BMPR1AP36894 532 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 RFC5P40937 340 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 GRIN1Q05586 938 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 PTPROQ16827 1216 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 HYIQ5T013 277 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 CATSPER4Q7RTX7 472 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 MTRQ99707 1265 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 ANKEF1Q9NU02 776 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms