RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 DMP1Q13316 513 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-206ENST00000431390 KNOP1Q1ED39 458 aaKnown RBP20.08■□□□□ 0.81
HMGN1-206ENST00000431390 LENG1Q96BZ8 264 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-206ENST00000431390 POLR3FQ9H1D9 316 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-206ENST00000431390 RNPEPQ9H4A4 650 aa20.08■□□□□ 0.81
HMGN1-206ENST00000431390 IGKV6-21A0A0C4DH24 114 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 K7ENM7 598 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 PRPF6O94906 941 aaKnown RBP20.08■□□□□ 0.8
HMGN1-206ENST00000431390 ADCY5O95622 1261 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 FGFR1OPO95684 399 aaKnown RBP20.08■□□□□ 0.8
HMGN1-206ENST00000431390 ATP1A3P13637 1013 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 SYN1P17600 705 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 MNX1P50219 401 aaPredicted RBP20.08■□□□□ 0.8
HMGN1-206ENST00000431390 PEX3P56589 373 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 SPAG1Q07617 926 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 CCDC173Q0VFZ6 552 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 NELFCDQ8IXH7 590 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 CSGALNACT2Q8N6G5 542 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 IFT74Q96LB3 600 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 NTPCRQ9BSD7 190 aaKnown RBP20.08■□□□□ 0.8
HMGN1-206ENST00000431390 TRIM5Q9C035 493 aa20.08■□□□□ 0.8
HMGN1-206ENST00000431390 FRMPD3Q5JV73 1810 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 F2P00734 622 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
HMGN1-206ENST00000431390 CDK11BP21127 795 aaKnown RBP20.07■□□□□ 0.8
HMGN1-206ENST00000431390 SCP2P22307 547 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 ABCD1P33897 745 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 BMP8BP34820 402 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 ARL2P36404 184 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 NPTX2P47972 431 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 GJA9P57773 515 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 NKX3-2P78367 333 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 FANCCQ00597 558 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 EDRF1Q3B7T1 1238 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 MAP3K21Q5TCX8 1036 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 TCP11Q8WWU5 503 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 HVCN1Q96D96 273 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 PDLIM2Q96JY6 352 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 SRRTQ9BXP5 876 aaKnown RBP20.07■□□□□ 0.8
HMGN1-206ENST00000431390 UPF3AQ9H1J1 476 aaKnown RBP20.07■□□□□ 0.8
HMGN1-206ENST00000431390 TRAF3IP3Q9Y228 551 aa20.07■□□□□ 0.8
HMGN1-206ENST00000431390 KAT6AQ92794 2004 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 H0YCG3 227 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 PDXKO00764 312 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 INSRRP14616 1297 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 HOXD13P35453 343 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 GTF2BQ00403 316 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 PPP2R5AQ15172 486 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 FSCN1Q16658 493 aaKnown RBP20.06■□□□□ 0.8
HMGN1-206ENST00000431390 IER5Q5VY09 327 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 FAM114A1Q8IWE2 563 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 KCNN1Q92952 543 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 C11orf49Q9H6J7 331 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 KMT5AQ9NQR1 393 aa20.06■□□□□ 0.8
HMGN1-206ENST00000431390 TYW1Q9NV66 732 aaKnown RBP20.06■□□□□ 0.8
HMGN1-206ENST00000431390 MAGEB2O15479 319 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 KPNA6O60684 536 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 SERPINC1P01008 464 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 RARBP10826 455 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 CNGA1P29973 690 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 ZNF75DP51815 510 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 ZC2HC1CQ53FD0 456 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-206ENST00000431390 HAUS6Q7Z4H7 955 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 BSNDQ8WZ55 320 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 MRFAP1L1Q96HT8 127 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 PPP1R9BQ96SB3 815 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 TMEM206Q9H813 350 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
HMGN1-206ENST00000431390 CCDC169A6NNP5 214 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 SLC16A4O15374 487 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 CBFA2T2O43439 604 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 CALUO43852 315 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 EEF1GP26641 437 aaKnown RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 NAMPTP43490 491 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 FKBP3Q00688 224 aaKnown RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 NFIL3Q16649 462 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ZC3H3Q8IXZ2 948 aaKnown RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 RETREG2Q8NC44 543 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 TMEM161BQ8NDZ6 487 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ANKRD20A12PQ8NF67 263 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 TMEM143Q96AN5 459 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 CTAGE1Q96RT6 745 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 KATNAL1Q9BW62 490 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 OGDHLQ9ULD0 1010 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ZMYM2Q9UBW7 1377 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 SIP14410 1827 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 C22orf31O95567 290 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 GLRA2P23416 452 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 MAGEA10P43363 369 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 HSP90AA4PQ58FG1 418 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 TCP11X2Q5H9J9 407 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 LRRC55Q6ZSA7 311 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 Q7L0L9 218 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 KAT2BQ92831 832 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 CEP63Q96MT8 703 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ACCSQ96QU6 501 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 IFNKQ9P0W0 207 aa20.04■□□□□ 0.8
HMGN1-206ENST00000431390 ARHGAP28Q9P2N2 729 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms