RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 LRWD1Q9UFC0 647 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 C5orf67F2Z3F1 127 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 H3BNC9 293 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 ASAP2O43150 1006 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 BMPR1AP36894 532 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 PDIA5Q14554 519 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 PRDM6Q9NQX0 595 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 CHST12Q9NRB3 414 aa17.04■□□□□ 0.32
TSPAN9-203ENST00000431374 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 RB1P06400 928 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 FGFR1P11362 822 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 MUTP22033 750 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 ARL2P36404 184 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 ATP2C1P98194 919 aaPredicted RBP17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 GPM6BQ13491 265 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 MXD4Q14582 209 aaPredicted RBP17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 ECM1Q16610 540 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 FAM102BQ5T8I3 360 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 DTHD1Q6ZMT9 781 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 SRGAP1Q7Z6B7 1085 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 ECHDC2Q86YB7 292 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 RNF149Q8NC42 400 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 DACT1Q9NYF0 836 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 WDR81Q562E7 1941 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 EVPLQ92817 2033 aa17.03■□□□□ 0.32
TSPAN9-203ENST00000431374 A0A0U1RQF3 1178 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 TBKBP1A7MCY6 615 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 PDCP20941 246 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 ZNF598Q86UK7 904 aaKnown RBP17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 SNX21Q969T3 373 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 TRAIPQ9BWF2 469 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 AGPAT5Q9NUQ2 364 aa17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 PIN4Q9Y237 131 aaKnown RBP17.02■□□□□ 0.32
TSPAN9-203ENST00000431374 VCANP13611 3396 aa17.02■□□□□ 0.31
TSPAN9-203ENST00000431374 PRRC2BQ5JSZ5 2229 aaKnown RBP17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 PP2D1A8MPX8 630 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 GLRA2P23416 452 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 PHKA2P46019 1235 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 PTENP60484 403 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 CAPSQ13938 189 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 TFDP1Q14186 410 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 PTPROQ16827 1216 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 TMEM117Q9H0C3 514 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 GPRC5CQ9NQ84 441 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
TSPAN9-203ENST00000431374 HOXA2O43364 376 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 EOMESO95936 686 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 POU5F1BQ06416 359 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 KRT79Q5XKE5 535 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 TWF2Q6IBS0 349 aaKnown RBP17■□□□□ 0.31
TSPAN9-203ENST00000431374 PADI6Q6TGC4 694 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 RNF169Q8NCN4 708 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 CASD1Q96PB1 797 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 MMTAG2Q9BU76 263 aaKnown RBP17■□□□□ 0.31
TSPAN9-203ENST00000431374 NFKBIZQ9BYH8 718 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 THEGQ9P2T0 379 aa17■□□□□ 0.31
TSPAN9-203ENST00000431374 COL4A4P53420 1690 aaPredicted RBP17■□□□□ 0.31
TSPAN9-203ENST00000431374 GRM6O15303 877 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 CYP11B2P19099 503 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 SYT1P21579 422 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 CDC25AP30304 524 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 HOXA11P31270 313 aaPredicted RBP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 MBTD1Q05BQ5 628 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 PCBP1Q15365 356 aaKnown RBP eCLIP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 SKIV2LQ15477 1246 aaKnown RBP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 CLLU1OSQ5K130 101 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 ARL6IP4Q66PJ3 421 aaKnown RBP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 MAEAQ7L5Y9 396 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 LMAN2LQ9H0V9 348 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 BHMT2Q9H2M3 363 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 TYW1Q9NV66 732 aaKnown RBP16.99■□□□□ 0.31
TSPAN9-203ENST00000431374 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms