RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MKNK1Q9BUB5 465 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 EDEM3Q9BZQ6 932 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 MAFBQ9Y5Q3 323 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 FHOD1Q9Y613 1164 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 ADGRA3Q8IWK6 1321 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 DENND3A2RUS2 1198 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 PDHXO00330 501 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 DGAT1O75907 488 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
USHBP1-203ENST00000431146 SMTNP53814 917 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 KRT83P78385 493 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CBWD6Q4V339 395 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CBWD3Q5JTY5 395 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CBWD5Q5RIA9 395 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CCDC122Q5T0U0 273 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 TMEM63BQ5T3F8 832 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 GBP6Q6ZN66 633 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 MS4A4AQ96JQ5 239 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 PDLIM7Q9NR12 457 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 AJAP1Q9UKB5 411 aaPredicted RBP18.22■□□□□ 0.51
USHBP1-203ENST00000431146 TBX20Q9UMR3 447 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 DUSP10Q9Y6W6 482 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 GOLGA8IPA6NC78 632 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 GOLGA8JA6NMD2 632 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 IPO7O95373 1038 aaKnown RBP18.22■□□□□ 0.51
USHBP1-203ENST00000431146 OATP04181 439 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 UCHL3P15374 230 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 DLG4P78352 724 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 CCL15Q16663 113 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 KLHDC7AQ5VTJ3 777 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 SLC9A9Q8IVB4 645 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 POLR3FQ9H1D9 316 aaPredicted RBP18.22■□□□□ 0.51
USHBP1-203ENST00000431146 ST6GALNAC4Q9H4F1 302 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 ATP6V0A4Q9HBG4 840 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 SIX2Q9NPC8 291 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
USHBP1-203ENST00000431146 BTBD19C9JJ37 291 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 AKR1B10O60218 316 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 FMO5P49326 533 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 POLGP54098 1239 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-203ENST00000431146 GFPT1Q06210 699 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-203ENST00000431146 BFSP1Q12934 665 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 TMEM143Q96AN5 459 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
USHBP1-203ENST00000431146 TCF7P36402 384 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-203ENST00000431146 NCBP1Q09161 790 aaKnown RBP18.2■□□□□ 0.5
USHBP1-203ENST00000431146 NEDD9Q14511 834 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 EMC2Q15006 297 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 SPA17Q15506 151 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 MCPH1Q8NEM0 835 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 BRI3BPQ8WY22 251 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 MROH8Q9H579 483 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 GBA2Q9HCG7 927 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-203ENST00000431146 PLCB1Q9NQ66 1216 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 PNMA3Q9UL41 463 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 IGKV6D-21A0A0A0MT36 114 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 CELF2O95319 508 aaKnown RBP18.2■□□□□ 0.5
USHBP1-203ENST00000431146 ADSSP30520 456 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 COPB2P35606 906 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 COPS5Q92905 334 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 SAAL1Q96ER3 474 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 HAUS4Q9H6D7 363 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
USHBP1-203ENST00000431146 USP20Q9Y2K6 914 aa18.2■□□□□ 0.5
USHBP1-203ENST00000431146 PNMA6AP0CW24 399 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-203ENST00000431146 CETPP11597 493 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 MARK3P27448 753 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 HSDL1Q3SXM5 330 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 SLC9C1Q4G0N8 1177 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 METTL7BQ6UX53 244 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 MAP4K3Q8IVH8 894 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 CARD6Q9BX69 1037 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 IFIH1Q9BYX4 1025 aaKnown RBP18.19■□□□□ 0.5
USHBP1-203ENST00000431146 PDGFCQ9NRA1 345 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 SERPING1P05155 500 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 TGFB3P10600 412 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 CNGA1P29973 690 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 STAT5BP51692 787 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-203ENST00000431146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
USHBP1-203ENST00000431146 GPRC5AQ8NFJ5 357 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
USHBP1-203ENST00000431146 NUCKS1Q9H1E3 243 aaKnown RBP18.19■□□□□ 0.5
USHBP1-203ENST00000431146 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 MACROD2A1Z1Q3 448 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 ADRB2P07550 413 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 KRT13P13646 458 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 GTF2A2P52657 109 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 VAV2P52735 878 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms