RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	KCTD17	Q8N5Z5	321 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	DYDC2	Q96IM9	177 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	TRIM15	Q9C019	465 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	CCSER1	Q9C0I3	900 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	KIF9	Q9HAQ2	790 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	MRPL40	Q9NQ50	206 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	DDX56	Q9NY93	547 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	IP6K2	Q9UHH9	426 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	HSPA4L	O95757	839 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	RECQL	P46063	649 aa	Predicted RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	FBXO38	Q6PIJ6	1188 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SYT2	Q8N9I0	419 aa	Predicted RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	WRNIP1	Q96S55	665 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	C11orf70	Q9BRQ4	267 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	ZWILCH	Q9H900	591 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	HECW2	Q9P2P5	1572 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SFI1	A8K8P3	1242 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	ACSL3	O95573	720 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	LMNA	P02545	664 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	PYGB	P11216	843 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SOX5	P35711	763 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	GPC3	P51654	580 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	FRMD5	Q7Z6J6	570 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	MRPL4	Q9BYD3	311 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	ADGRG1	Q9Y653	693 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	POTEB3	A0JP26	581 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	POTEC	B2RU33	542 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	IFNA8	P32881	189 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	GPSM2	P81274	684 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	OCRL	Q01968	901 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	LLGL1	Q15334	1064 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	NBPF9	Q3BBW0	867 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	ITPRIPL1	Q6GPH6	555 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	KRT80	Q6KB66	452 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	POTEB	Q6S5H4	581 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	PLAA	Q9Y263	795 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SLC10A5	Q5PT55	438 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	RHOT1	Q8IXI2	618 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	RFFL	Q8WZ73	363 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	RUBCN	Q92622	972 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	CCDC138	Q96M89	665 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	BFAR	Q9NZS9	450 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SCOC	Q9UIL1	159 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	PCDHA10	Q9Y5I2	948 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	SLC16A4	O15374	487 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	CTIF	O43310	598 aa	Known RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	EYA4	O95677	639 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	TMPRSS15	P98073	1019 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	MDM2	Q00987	491 aa	Predicted RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	FAM182B	Q5T319	152 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	OXER1	Q8TDS5	423 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	CFAP36	Q96G28	342 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	2e-7	■■□□□ 12
ARID1A-204	ENST00000430799	WNT8A	Q9H1J5	351 aa		11.69	□□□□□ -0.54
ARID1A-204	ENST00000430799	PNPLA6	Q8IY17	1366 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TRIM49B	A6NDI0	452 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	MAP3K7	O43318	606 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	RNF168	Q8IYW5	571 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	FAM213A	Q9BRX8	229 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	INTS2	Q9H0H0	1204 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	RAVER2	Q9HCJ3	691 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	KCNJ6	P48051	423 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	FBXL13	Q8NEE6	735 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	FAM84B	Q96KN1	310 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TRAIP	Q9BWF2	469 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TMEM60	Q9H2L4	133 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TUFT1	Q9NNX1	390 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	ASB14	A6NK59	587 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TBX3	O15119	743 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	INPP1	P49441	399 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CACNB3	P54284	484 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CDC42EP1	Q00587	391 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CDO1	Q16878	200 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	MARK3	P27448	753 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	SMARCA1	P28370	1054 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CDC27	P30260	824 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	DRAP1	Q14919	205 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	CEP55	Q53EZ4	464 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	ZNF560	Q96MR9	790 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	MYCBP	Q99417	103 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	APOBEC2	Q9Y235	224 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	RASA4B	C9J798	803 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	SLC16A3	O15427	465 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	ASAP2	O43150	1006 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	RASA4	O43374	803 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	MME	P08473	750 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	ZFX	P17010	805 aa	Predicted RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TEDDM1	Q5T9Z0	273 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	C12orf60	Q5U649	245 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	TWF2	Q6IBS0	349 aa	Known RBP	11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	NRBF2	Q96F24	287 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	GJB4	Q9NTQ9	266 aa		11.68	□□□□□ -0.54
ARID1A-204	ENST00000430799	MED14	O60244	1454 aa		11.67	□□□□□ -0.54
ARID1A-204	ENST00000430799	USP42	Q9H9J4	1324 aa	Known RBP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms