RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 BFSP2Q13515 415 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 MAP7D1Q3KQU3 841 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 ANXA13P27216 316 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 ZNF569Q5MCW4 686 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 LRRC71Q8N4P6 559 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CASP1P29466 404 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CCDC51Q96ER9 411 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 MYO1AQ9UBC5 1043 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 FAM169AQ9Y6X4 670 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 UNCXA6NJT0 531 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 HOXC6P09630 235 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 SLC26A2P50443 739 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 NAALADL2Q58DX5 795 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 DPF3Q92784 378 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 MSCO60682 206 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 TUBB4AP04350 444 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 FMR1NBQ8N0W7 255 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 UBLCP1Q8WVY7 318 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CYP39A1Q9NYL5 469 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 RPLP2P05387 115 aaKnown RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 GPD1LQ8N335 351 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 PFDN4Q9NQP4 134 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 USTQ9Y2C2 406 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 XIRP1Q702N8 1843 aaKnown RBP13.98□□□□□ -0.17
PTCH1-207ENST00000429896 THAP12O43422 761 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 CYP2C19P33261 490 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 BTNL9Q6UXG8 535 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 TXNDC16Q9P2K2 825 aa13.98□□□□□ -0.17
PTCH1-207ENST00000429896 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 ENOX1Q8TC92 643 aaKnown RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 ACAP3Q96P50 834 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 NIPA1Q7RTP0 329 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CATSPER3Q86XQ3 398 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 TTLL3Q9Y4R7 772 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 MED7O43513 233 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 MNAT1P51948 309 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 ZNF667Q5HYK9 610 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 SCARA5Q6ZMJ2 495 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CIITAP33076 1130 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 MAGEA1P43355 309 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 C11orf57Q6ZUT1 292 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 SPATA24Q86W54 205 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 REEP2Q9BRK0 252 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 ABCA3Q99758 1704 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 KIAA0391O15091 583 aaKnown RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CRCPO75575 148 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 SHROOM1Q2M3G4 852 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CEP57Q86XR8 500 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
PTCH1-207ENST00000429896 CACNA1FO60840 1977 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 ZNF286BP0CG31 522 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 MUTP22033 750 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 APLP1P51693 650 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 OR8K1Q8NGG5 319 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-207ENST00000429896 VPS18Q9P253 973 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
PTCH1-207ENST00000429896 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 HUS1O60921 280 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 CD58P19256 250 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 UBL4BQ8N7F7 174 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 GMLQ99445 158 aa13.96□□□□□ -0.17
PTCH1-207ENST00000429896 EGFRP00533 1210 aa13.96□□□□□ -0.18
PTCH1-207ENST00000429896 NSFP46459 744 aaKnown RBP13.96□□□□□ -0.18
PTCH1-207ENST00000429896 DLK2Q6UY11 383 aa13.96□□□□□ -0.18
PTCH1-207ENST00000429896 TSKSQ9UJT2 592 aa13.96□□□□□ -0.18
PTCH1-207ENST00000429896 CYTH3O43739 400 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
PTCH1-207ENST00000429896 CFAP157Q5JU67 520 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
PTCH1-207ENST00000429896 STIM2Q9P246 746 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 ATRNL1Q5VV63 1379 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 SAAL1Q96ER3 474 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 ZDHHC9Q9Y397 364 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 NPEPPSP55786 919 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms