RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 E9PMD0 336 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 EIF3DO15371 548 aaKnown RBP eCLIP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 NCK2O43639 380 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 PPP1R11O60927 126 aaPredicted RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 KIF4AO95239 1232 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 GJA5P36382 358 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 HSPA9P38646 679 aaKnown RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 GNGT1P63211 74 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 SLC7A5Q01650 507 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 CRHR2Q13324 411 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 PICALMQ13492 652 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 GIT2Q14161 759 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 EXOC3L4Q17RC7 722 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 TTC31Q49AM3 519 aaPredicted RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 RUFY4Q6ZNE9 571 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 GSPT2Q8IYD1 628 aaKnown RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 HDAC7Q8WUI4 952 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 TEKT1Q969V4 418 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 MKNK1Q9BUB5 465 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 AMNQ9BXJ7 453 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 SLITRK6Q9H5Y7 841 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 SUCLA2Q9P2R7 463 aaPredicted RBP9.48□□□□□ -0.89
GABPB1-205ENST00000429662 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 A0A087X0T9 212 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 SPDYE3A6NKU9 549 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 PGRMC1O00264 195 aaKnown RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 MPHOSPH10O00566 681 aaKnown RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 NKRFO15226 690 aaKnown RBP eCLIP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TBCAO75347 108 aaKnown RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 EYA4O95677 639 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 CYP3A4P08684 503 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 H2AFZP0C0S5 128 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 FAM228BP0C875 321 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 UCHL3P15374 230 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 RFX1P22670 979 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 CXCR5P32302 372 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 SREBF1P36956 1147 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 STAT1P42224 750 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 PTPN5P54829 565 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ARHGAP4P98171 946 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 GUCY2DQ02846 1103 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 BIRC3Q13489 604 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 QRICH1Q2TAL8 776 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 NBPF9Q3BBW0 867 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 SLFN13Q68D06 897 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TTBK2Q6IQ55 1244 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 H2AFVQ71UI9 128 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 MAATS1Q7Z4T9 603 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 IRF2BP2Q7Z5L9 587 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 SLFN11Q7Z7L1 901 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 NELFCDQ8IXH7 590 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ANKRD13CQ8N6S4 541 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 FAM133AQ8N9E0 248 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 GMCL1P1Q8NEA9 526 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ETNPPLQ8TBG4 499 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 BCAS4Q8TDM0 211 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 CRYGNQ8WXF5 182 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 GMCL1Q96IK5 515 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 GDAP1L1Q96MZ0 367 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 KRT12Q99456 494 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 MYOZ2Q9NPC6 264 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 OLFML3Q9NRN5 406 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 KCND2Q9NZV8 630 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 SEL1LQ9UBV2 794 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 ADAMTS1Q9UHI8 967 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 LCMT1Q9UIC8 334 aa9.47□□□□□ -0.89
GABPB1-205ENST00000429662 TTC7AQ9ULT0 858 aaPredicted RBP9.47□□□□□ -0.89
GABPB1-205ENST00000429662 FOCADQ5VW36 1801 aa9.46□□□□□ -0.89
GABPB1-205ENST00000429662 CDK5RAP2Q96SN8 1893 aa9.46□□□□□ -0.89
GABPB1-205ENST00000429662 A0A1W2PPC1 479 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 MED24O75448 989 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 GLI1P08151 1106 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 PON1P27169 355 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 USP8P40818 1118 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 CARSP49589 748 aaKnown RBP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 CDR1P51861 262 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 ATP2B2Q01814 1243 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 PTK2Q05397 1052 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 MYBPC2Q14324 1141 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 TTMPQ5BVD1 217 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 ALKBH5Q6P6C2 394 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms