RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-216	ENST00000428482	PIN4	Q9Y237	131 aa	Known RBP	11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	INSL6	Q9Y581	213 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	PLXNA3	P51805	1871 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	TRIP11	Q15643	1979 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	TBKBP1	A7MCY6	615 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	GRM6	O15303	877 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	B4GALT5	O43286	388 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	EIF4B	P23588	611 aa	Known RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	DNAJB1	P25685	340 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	PTGDR	Q13258	359 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	BTG3	Q14201	252 aa	Predicted RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	CDR2L	Q86X02	465 aa	Predicted RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	TMEM192	Q8IY95	271 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	NME8	Q8N427	588 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	NEK9	Q8TD19	979 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	TNPO1	Q92973	898 aa	Known RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	MMTAG2	Q9BU76	263 aa	Known RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	ATP6V0A4	Q9HBG4	840 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	RGS18	Q9NS28	235 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	NOL7	Q9UMY1	257 aa	Known RBP	11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	PCDHA12	Q9UN75	941 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	USP20	Q9Y2K6	914 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	SQOR	Q9Y6N5	450 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	CUL9	Q8IWT3	2517 aa		11.41	□□□□□ -0.58
HDLBP-216	ENST00000428482	TTLL13P	A6NNM8	815 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482		H3BQV1	296 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	LYPLA2	O95372	231 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	BAG4	O95429	457 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	RPLP2	P05387	115 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	GLRA2	P23416	452 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	TMOD1	P28289	359 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	1e-7	■■■■□ 24.6
HDLBP-216	ENST00000428482	IRS1	P35568	1242 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	FXR2	P51116	673 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	7e-7	■□□□□ 10.9
HDLBP-216	ENST00000428482	KCNQ1	P51787	676 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	LAMTOR4	Q0VGL1	99 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	REST	Q13127	1097 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	LRRC55	Q6ZSA7	311 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	ADGRD2	Q7Z7M1	963 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	ZNF598	Q86UK7	904 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	TMEM173	Q86WV6	379 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	ECHDC2	Q86YB7	292 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	FIBCD1	Q8N539	461 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	RNF149	Q8NC42	400 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	HELQ	Q8TDG4	1101 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	SNX29	Q8TEQ0	813 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	PRPF31	Q8WWY3	499 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	SLC7A3	Q8WY07	619 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	CPB2	Q96IY4	423 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	NECAB3	Q96P71	396 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	FTHL17	Q9BXU8	183 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	AGPAT5	Q9NUQ2	364 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	CHMP5	Q9NZZ3	219 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	THEG	Q9P2T0	379 aa		11.4	□□□□□ -0.58
HDLBP-216	ENST00000428482	TRIO	O75962	3097 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	TSPAN1	O60635	241 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	ITGB1	P05556	798 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	SRGAP2C	P0DJJ0	459 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CCT6A	P40227	531 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	RFC5	P40937	340 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	TRAPPC10	P48553	1259 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	AFF1	P51825	1210 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	ATP2C1	P98194	919 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	MBTD1	Q05BQ5	628 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	GPM6B	Q13491	265 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CAMK1	Q14012	370 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	SKIV2L	Q15477	1246 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	AMHR2	Q16671	573 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	UBXN11	Q5T124	520 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CMTR2	Q8IYT2	770 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	PSPC1	Q8WXF1	523 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CLP1	Q92989	425 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CCDC43	Q96MW1	224 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CASD1	Q96PB1	797 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	PNMA5	Q96PV4	448 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	RUSC1	Q9BVN2	902 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	EIF2A	Q9BY44	585 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	CWH43	Q9H720	699 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	ALG13	Q9NP73	1137 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	DDX19A	Q9NUU7	478 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	VWA8	A3KMH1	1905 aa		11.39	□□□□□ -0.59
HDLBP-216	ENST00000428482	DENND4A	Q7Z401	1863 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	TSC2	P49815	1807 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	VWA3A	A6NCI4	1184 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482		E9PMD0	336 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	GPR182	O15218	404 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	HSP90AA1	P07900	732 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	SFPQ	P23246	707 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	1e-6	■■□□□ 12
HDLBP-216	ENST00000428482	NUCB2	P80303	420 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	RBM10	P98175	930 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	TCEAL5	Q5H9L2	206 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	CLEC17A	Q6ZS10	378 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	CATSPER4	Q7RTX7	472 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	ZNF410	Q86VK4	478 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	IGSF22	Q8N9C0	903 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	PLIN2	Q99541	437 aa		11.38	□□□□□ -0.59
HDLBP-216	ENST00000428482	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms