RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
PHF1-203ENST00000427004 IFT122Q9HBG6 1241 aa17.06■□□□□ 0.32
PHF1-203ENST00000427004 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
PHF1-203ENST00000427004 STK24Q9Y6E0 443 aa17.06■□□□□ 0.32
PHF1-203ENST00000427004 MGEA5O60502 916 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 NR1I2O75469 434 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
PHF1-203ENST00000427004 TMOD1P28289 359 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 PEX3P56589 373 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 CUL4BQ13620 913 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 SHHQ15465 462 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 TMEM240Q5SV17 173 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 IER5Q5VY09 327 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 RSPH3Q86UC2 560 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 PSPC1Q8WXF1 523 aaKnown RBP17.05■□□□□ 0.32
PHF1-203ENST00000427004 LINC01599Q8WXQ3 324 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 DNAJC19Q96DA6 116 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 GDF15Q99988 308 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
PHF1-203ENST00000427004 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
PHF1-203ENST00000427004 A0A1W2PQ27 194 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 A0A1W2PQ64 194 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 A0A1W2PQD8 194 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 B4GALT5O43286 388 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 SYKP43405 635 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
PHF1-203ENST00000427004 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
PHF1-203ENST00000427004 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
PHF1-203ENST00000427004 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 RPAINQ86UA6 219 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 RTN4RL1Q86UN2 441 aaPredicted RBP17.04■□□□□ 0.32
PHF1-203ENST00000427004 DDX12PQ92771 950 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 UBE2OQ9C0C9 1292 aaKnown RBP17.04■□□□□ 0.32
PHF1-203ENST00000427004 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 PADI3Q9ULW8 664 aa17.04■□□□□ 0.32
PHF1-203ENST00000427004 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 GRXCR1A8MXD5 290 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 M0QZ92 97 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 SLC16A4O15374 487 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 ZNF202O95125 648 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 IDEP14735 1019 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 DARSP14868 501 aaKnown RBP17.03■□□□□ 0.32
PHF1-203ENST00000427004 NMT1P30419 496 aaKnown RBP17.03■□□□□ 0.32
PHF1-203ENST00000427004 DNM2P50570 870 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 FAM117BQ6P1L5 589 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHF1-203ENST00000427004 TAS1R3Q7RTX0 852 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 SFR1Q86XK3 245 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 ST3GAL5Q9UNP4 418 aa17.03■□□□□ 0.32
PHF1-203ENST00000427004 RANBP2P49792 3224 aaKnown RBP17.03■□□□□ 0.32
PHF1-203ENST00000427004 FAM237AA0A1B0GTK4 181 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 ZBBXA8MT70 800 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 RPS6KA5O75582 802 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 CXCL10P02778 98 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 GUCY2CP25092 1073 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.32
PHF1-203ENST00000427004 DEFB103AP81534 67 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 PPIGQ13427 754 aaKnown RBP eCLIP17.02■□□□□ 0.326e-8■■■■■ 27.9
PHF1-203ENST00000427004 PLEKHG4Q58EX7 1191 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 KRBA2Q6ZNG9 492 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 FMR1NBQ8N0W7 255 aaPredicted RBP17.02■□□□□ 0.32
PHF1-203ENST00000427004 NME8Q8N427 588 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 IQUBQ8NA54 791 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 MCPH1Q8NEM0 835 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 TCP11Q8WWU5 503 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 PAGE5Q96GU1 130 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 IFIH1Q9BYX4 1025 aaKnown RBP17.02■□□□□ 0.32
PHF1-203ENST00000427004 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
PHF1-203ENST00000427004 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 SLC26A4O43511 780 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 FAM13AO94988 1023 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 NPTX2P47972 431 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 CASP5P51878 434 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 ASIC1P78348 528 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 MBTD1Q05BQ5 628 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 PAK2Q13177 524 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 PNOCQ13519 176 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 ZC2HC1CQ53FD0 456 aaPredicted RBP17.01■□□□□ 0.31
PHF1-203ENST00000427004 TSHZ1Q6ZSZ6 1077 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 MYCT1Q8N699 235 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 JPH2Q9BR39 696 aaPredicted RBP17.01■□□□□ 0.31
PHF1-203ENST00000427004 INO80BQ9C086 356 aaPredicted RBP17.01■□□□□ 0.31
PHF1-203ENST00000427004 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
PHF1-203ENST00000427004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
PHF1-203ENST00000427004 EIF4BP23588 611 aaKnown RBP17■□□□□ 0.31
PHF1-203ENST00000427004 GATMP50440 423 aa17■□□□□ 0.31
PHF1-203ENST00000427004 PTENP60484 403 aa17■□□□□ 0.31
PHF1-203ENST00000427004 FIZ1Q96SL8 496 aa17■□□□□ 0.31
PHF1-203ENST00000427004 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
PHF1-203ENST00000427004 TRIM9Q9C026 710 aa17■□□□□ 0.31
PHF1-203ENST00000427004 RNF19AQ9NV58 838 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms