RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 SCP2P22307 547 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 DNM2P50570 870 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 IGBP1P78318 339 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 CCDC40Q4G0X9 1142 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 TMC6Q7Z403 805 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 TMEM161BQ8NDZ6 487 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 BSNDQ8WZ55 320 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 IMPACTQ9P2X3 320 aa16.6■□□□□ 0.25
GINS3-203ENST00000426538 FKTNO75072 461 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 DUSP11O75319 330 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 NR3C1P04150 777 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 CYBAP13498 195 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 NAMPTP43490 491 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 MXD4Q14582 209 aaPredicted RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 METTL13Q8N6R0 699 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 RAET1EQ8TD07 263 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 SAGE1Q9NXZ1 904 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 CGNQ9P2M7 1197 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 TBX20Q9UMR3 447 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 IGKV6-21A0A0C4DH24 114 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 LRRIQ4A6NIV6 560 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 MAGEB2O15479 319 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 TEX33O43247 280 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 COL1A2P08123 1366 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 GLRA2P23416 452 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 SNRPFP62306 86 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 CAP1Q01518 475 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 UBXN1Q04323 297 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 NFIL3Q16649 462 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 EFCAB12Q6NXP0 572 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 VSTM4Q8IW00 320 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 ZC3H3Q8IXZ2 948 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 TRAPPC12Q8WVT3 735 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 PRPF31Q8WWY3 499 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
GINS3-203ENST00000426538 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 KIFC3Q9BVG8 833 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
GINS3-203ENST00000426538 ZMYM2Q9UBW7 1377 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 SEPT4O43236 478 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 ADCY3O60266 1144 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.24
GINS3-203ENST00000426538 CEP135Q66GS9 1140 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 LRRC71Q8N4P6 559 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 AGPAT3Q9NRZ7 376 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 PCNTO95613 3336 aa16.58■□□□□ 0.24
GINS3-203ENST00000426538 K7ERI5 159 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 MYL3P08590 195 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 C6orf222P0C671 652 aaPredicted RBP16.57■□□□□ 0.24
GINS3-203ENST00000426538 RARBP10826 455 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 ELNP15502 786 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 KLRC1P26715 233 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 TMOD1P28289 359 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 STRN3Q13033 797 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
GINS3-203ENST00000426538 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 SPECC1LQ69YQ0 1117 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 MAP4K3Q8IVH8 894 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 ASAP3Q8TDY4 903 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 ARHGAP28Q9P2N2 729 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 SUCLA2Q9P2R7 463 aaPredicted RBP16.57■□□□□ 0.24
GINS3-203ENST00000426538 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 CASP8AP2Q9UKL3 1982 aa16.57■□□□□ 0.24
GINS3-203ENST00000426538 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 LGALS16A8MUM7 142 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 ASAP2O43150 1006 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 F2P00734 622 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 MARSP56192 900 aaKnown RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 GSDMDP57764 484 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 BEX3Q00994 111 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 DRP2Q13474 957 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 MYBPC2Q14324 1141 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 ZNF296Q8WUU4 475 aaPredicted RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 BICD1Q96G01 975 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 METTL14Q9HCE5 456 aaKnown RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 ADGRA3Q8IWK6 1321 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 SLC16A3O15427 465 aaKnown RBP16.56■□□□□ 0.24
GINS3-203ENST00000426538 KPNA6O60684 536 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 C22orf31O95567 290 aa16.56■□□□□ 0.24
GINS3-203ENST00000426538 HMGCRP04035 888 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms