RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 LMBR1Q8WVP7 490 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 DHX38Q92620 1227 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 GLT1D1Q96MS3 346 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 GOLPH3LQ9H4A5 285 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 ZSWIM4Q9H7M6 989 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 POLD4Q9HCU8 107 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 TUFT1Q9NNX1 390 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 DDX19AQ9NUU7 478 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 ERAP1Q9NZ08 941 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 ZNF215Q9UL58 517 aaPredicted RBP6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 KIAA1024Q9UPX6 916 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 ATP11BQ9Y2G3 1177 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 ATP6V1DQ9Y5K8 247 aa6.39□□□□□ -1.39
HERPUD2-204ENST00000426180 C17orf102A2RUQ5 167 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 HBP1O60381 514 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 B4GALT4O60513 344 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 CUTAO60888 179 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 C22orf31O95567 290 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 CD4P01730 458 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 CYP2C9P11712 490 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 PLCG1P19174 1290 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 YWHABP31946 246 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 FAAP100Q0VG06 881 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 TRIM71Q2Q1W2 868 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 XKR3Q5GH77 459 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 HYIQ5T013 277 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 RESP18Q5W5W9 173 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 NFRKBQ6P4R8 1299 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 SH3RF1Q7Z6J0 888 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 SESTD1Q86VW0 696 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 FAM126BQ8IXS8 530 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 ERMNQ8TAM6 284 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 NEK9Q8TD19 979 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 ATP6V0A1Q93050 837 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 KATNAL1Q9BW62 490 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 NRBP2Q9NSY0 501 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 BLOC1S4Q9NUP1 217 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 GTF2IRD1Q9UHL9 959 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 MYH15Q9Y2K3 1946 aa6.38□□□□□ -1.39
HERPUD2-204ENST00000426180 UMODL1Q5DID0 1318 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 NPHP3-ACAD11A0A0J9YXS1 232 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 A0A1B0GVL5 298 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 MBLAC1A4D2B0 266 aaPredicted RBP6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 TRIM43BA6NCK2 446 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 PFKFB1P16118 471 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CAPN2P17655 700 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 ITGB8P26012 769 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 KLRC1P26715 233 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 UBA7P41226 1012 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 SLC26A2P50443 739 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CLCN3P51790 818 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 NDUFA8P51970 172 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 DRP2Q13474 957 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 MCM6Q14566 821 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 PTGISQ16647 500 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 NAALADL2Q58DX5 795 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 XKR9Q5GH70 373 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 ZNF484Q5JVG2 852 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 HAUS3Q68CZ6 603 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 ADALQ6DHV7 355 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CLEC17AQ6ZS10 378 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 ANKRD33Q7Z3H0 272 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 C7orf61Q8IZ16 206 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 LRRC71Q8N4P6 559 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 LINC01465Q8N7H1 131 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 PDILTQ8N807 584 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 TSC1Q92574 1164 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 RAD54LQ92698 747 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 TRIM43Q96BQ3 446 aaPredicted RBP6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 FAM167AQ96KS9 214 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CEP170P1Q96L14 293 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 AK8Q96MA6 479 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 NACC1Q96RE7 527 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 OSBPL7Q9BZF2 842 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CCSER1Q9C0I3 900 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 BHMT2Q9H2M3 363 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 XPNPEP1Q9NQW7 623 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 PDLIM7Q9NR12 457 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 CYP26B1Q9NR63 512 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 ANKEF1Q9NU02 776 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 DBR1Q9UK59 544 aaKnown RBP6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 BRCA2P51587 3418 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 SCN10AQ9Y5Y9 1956 aa6.37□□□□□ -1.39
HERPUD2-204ENST00000426180 COL1A2P08123 1366 aa6.36□□□□□ -1.39
HERPUD2-204ENST00000426180 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
HERPUD2-204ENST00000426180 IGKV6-21A0A0C4DH24 114 aa6.36□□□□□ -1.39
HERPUD2-204ENST00000426180 FAM237AA0A1B0GTK4 181 aa6.36□□□□□ -1.39
HERPUD2-204ENST00000426180 A0A1W2PQ27 194 aa6.36□□□□□ -1.39
HERPUD2-204ENST00000426180 A0A1W2PQ64 194 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms