RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 KSR1Q8IVT5 923 aa19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 ADAMTS19Q8TE59 1207 aa19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 MRPL38Q96DV4 380 aaKnown RBP19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 ELAC1Q9H777 363 aaKnown RBP19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 TUFT1Q9NNX1 390 aa19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 C5orf67F2Z3F1 127 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 ASAP2O43150 1006 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 HOXA2O43364 376 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 DGAT1O75907 488 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 FAM189BP81408 668 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 PRPF31Q8WWY3 499 aaKnown RBP19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 PLVAPQ9BX97 442 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 CHST12Q9NRB3 414 aa19.49■□□□□ 0.71
SLC6A1-202ENST00000425938 TBKBP1A7MCY6 615 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 TNFRSF10AO00220 468 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 CSDE1O75534 798 aaKnown RBP19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 SRGAP2CP0DJJ0 459 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 BMP1P13497 986 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 RARRES1P49788 294 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 GATMP50440 423 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 LAMTOR4Q0VGL1 99 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 NBR1Q14596 966 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 HAUS3Q68CZ6 603 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 CATSPER4Q7RTX7 472 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 POLR3CQ9BUI4 534 aaPredicted RBP19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 RAB34Q9BZG1 259 aa19.48■□□□□ 0.71
SLC6A1-202ENST00000425938 LAD1O00515 517 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 LINC00271P0C7V0 271 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 SPATA31C1P0DKV0 1188 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 RPA1P27694 616 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 TOB1P50616 345 aaPredicted RBP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 FXR2P51116 673 aaKnown RBP eCLIP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 PTGDRQ13258 359 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 MXD4Q14582 209 aaPredicted RBP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 TIGD5Q53EQ6 642 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 RILPL1Q5EBL4 403 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 SPOUT1Q5T280 376 aaKnown RBP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 FAM102BQ5T8I3 360 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 SRGAP1Q7Z6B7 1085 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 CATSPER3Q86XQ3 398 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 ECHDC2Q86YB7 292 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 ABI1Q8IZP0 508 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 RNF169Q8NCN4 708 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 NACC1Q96RE7 527 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 UHRF1Q96T88 793 aaPredicted RBP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 IFT122Q9HBG6 1241 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 AAASQ9NRG9 546 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 PIN4Q9Y237 131 aaKnown RBP19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 PCDHB6Q9Y5E3 794 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 NCOR1O75376 2440 aa19.47■□□□□ 0.71
SLC6A1-202ENST00000425938 MUC3AQ02505 3323 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 A0A0U1RQF3 1178 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 MED24O75448 989 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 FGFR1P11362 822 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 SKIP12755 728 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 PHKA2P46019 1235 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 KCNQ1P51787 676 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 TFDP1Q14186 410 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 NAALADL2Q58DX5 795 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 LARP1BQ659C4 914 aaKnown RBP19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 TWF2Q6IBS0 349 aaKnown RBP19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 C4orf32Q8N8J7 132 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 RNF149Q8NC42 400 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 P2RX5Q93086 422 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 TMEM117Q9H0C3 514 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 LMAN2LQ9H0V9 348 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 XPNPEP1Q9NQW7 623 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 LRWD1Q9UFC0 647 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 STK24Q9Y6E0 443 aa19.46■□□□□ 0.71
SLC6A1-202ENST00000425938 EOMESO95936 686 aa19.45■□□□□ 0.7
SLC6A1-202ENST00000425938 MUTP22033 750 aa19.45■□□□□ 0.7
SLC6A1-202ENST00000425938 DBR1Q9UK59 544 aaKnown RBP19.45■□□□□ 0.7
SLC6A1-202ENST00000425938 PCDHB12Q9Y5F1 795 aa19.45■□□□□ 0.7
SLC6A1-202ENST00000425938 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
SLC6A1-202ENST00000425938 A0A087WWV3 80 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 GRM6O15303 877 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 CCT6AP40227 531 aaKnown RBP19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 CUL4AQ13619 759 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 PDIA5Q14554 519 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 POTEGQ6S5H5 508 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 MCPH1Q8NEM0 835 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 AGPAT5Q9NUQ2 364 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 PLAGL2Q9UPG8 496 aa19.44■□□□□ 0.7
SLC6A1-202ENST00000425938 ATG2AQ2TAZ0 1938 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 ARHGEF35A5YM69 484 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 ERLIN2O94905 339 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 ARL2P36404 184 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 PRPHP41219 470 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 RAB27AP51159 221 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 PCBP1Q15365 356 aaKnown RBP eCLIP19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 CSPP1Q1MSJ5 1256 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 DTHD1Q6ZMT9 781 aa19.43■□□□□ 0.7
SLC6A1-202ENST00000425938 ZNF598Q86UK7 904 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms