RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 OTOP1Q7RTM1 612 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 FAM178BQ8IXR5 827 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 LRRC57Q8N9N7 239 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 CPSF2Q9P2I0 782 aaKnown RBP14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PRELPP51888 382 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PAK2Q13177 524 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 CEP55Q53EZ4 464 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 STXBP4Q6ZWJ1 553 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 ZC3H3Q8IXZ2 948 aaKnown RBP14.1□□□□□ -0.15
COL12A1-205ENST00000425443 TUFT1Q9NNX1 390 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 SMCHD1A6NHR9 2005 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 NDUFAB1O14561 156 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 KIF3CO14782 793 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 SLITRK3O94933 977 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 CYP2J2P51589 502 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 RPS6KA1Q15418 735 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 KDM7AQ6ZMT4 941 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 FAM186BQ8IYM0 893 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 TTLL6Q8N841 843 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 U2AF1L4Q8WU68 220 aaKnown RBP14.09□□□□□ -0.15
COL12A1-205ENST00000425443 SH2D3AQ9BRG2 576 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 DDX47Q9H0S4 455 aaKnown RBP14.09□□□□□ -0.15
COL12A1-205ENST00000425443 SIPA1L1O43166 1804 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 IGLV3-22A0A075B6J6 115 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 ARHGEF35A5YM69 484 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 ERLIN2O94905 339 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 PON1P27169 355 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 COG2Q14746 738 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 SWT1Q5T5J6 900 aaKnown RBP14.09□□□□□ -0.15
COL12A1-205ENST00000425443 ALKBH5Q6P6C2 394 aaKnown RBP14.09□□□□□ -0.15
COL12A1-205ENST00000425443 MREGQ8N565 214 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 OLIG1Q8TAK6 271 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 C7orf43Q8WVR3 580 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 NACC1Q96RE7 527 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 VCPKMTQ9H867 229 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
COL12A1-205ENST00000425443 H0YGN5 161 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 KIF4AO95239 1232 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 NR1D1P20393 614 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 PSMC2P35998 433 aaKnown RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 ITGB3BPQ13352 177 aaPredicted RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 LDHDQ86WU2 507 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 CPXCR1Q8N123 301 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 HSD17B14Q9BPX1 270 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 SIX2Q9NPC8 291 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 CHORDC1Q9UHD1 332 aaPredicted RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 SCAF8Q9UPN6 1271 aaKnown RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 CTDP1Q9Y5B0 961 aaPredicted RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 NFS1Q9Y697 457 aa14.08□□□□□ -0.15
COL12A1-205ENST00000425443 BZW2Q9Y6E2 419 aaKnown RBP14.08□□□□□ -0.15
COL12A1-205ENST00000425443 ASTN1O14525 1302 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 CAPN15O75808 1086 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 HSD17B3P37058 310 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 SLC15A2Q16348 729 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 CEP85LQ5SZL2 805 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 EPM2AIP1Q7L775 607 aaPredicted RBP14.08□□□□□ -0.16
COL12A1-205ENST00000425443 METTL13Q8N6R0 699 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 SCFD2Q8WU76 684 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 RNF14Q9UBS8 474 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 NAGPAQ9UK23 515 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 DCDC2CA8MYV0 355 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 MYO1FO00160 1098 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
COL12A1-205ENST00000425443 PSMD10O75832 226 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 FLOT1O75955 427 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 ARP10275 920 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 COPB2P35606 906 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL12A1-205ENST00000425443 TNIP1Q15025 636 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 ARHGAP44Q17R89 818 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 DAAM2Q86T65 1068 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 FAM160B2Q86V87 743 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 RTKN2Q8IZC4 609 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 ATP6V1G3Q96LB4 118 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 OLFML3Q9NRN5 406 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 HOMER2Q9NSB8 354 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 TCEAL9Q9UHQ7 104 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 PCNTO95613 3336 aa14.08□□□□□ -0.16
COL12A1-205ENST00000425443 BACH1O14867 736 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 SLC16A3O15427 465 aaKnown RBP14.07□□□□□ -0.16
COL12A1-205ENST00000425443 LRRN2O75325 713 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 TRIM49P0CI25 452 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 TRIM49CP0CI26 452 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 HSPA9P38646 679 aaKnown RBP14.07□□□□□ -0.16
COL12A1-205ENST00000425443 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 IFI16Q16666 785 aaKnown RBP14.07□□□□□ -0.16
COL12A1-205ENST00000425443 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
COL12A1-205ENST00000425443 PLCB1Q9NQ66 1216 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 SYNPO2Q9UMS6 1093 aa14.07□□□□□ -0.16
COL12A1-205ENST00000425443 RXRBP28702 533 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms