RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
SHOX2-202ENST00000425436 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 HIPK3Q9H422 1215 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 RWDD2AQ9UIY3 292 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 DNM3Q9UQ16 869 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 PPP1R3GB7ZBB8 358 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 KIAA0355O15063 1070 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 MUTP22033 750 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 CYP2C18P33260 490 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 THPOP40225 353 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 TMEM62Q0P6H9 643 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 HYIQ5T013 277 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 CCDC150Q8NCX0 1101 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 ZNF830Q96NB3 372 aaPredicted RBP17.26■□□□□ 0.35
SHOX2-202ENST00000425436 NOC4LQ9BVI4 516 aaKnown RBP17.26■□□□□ 0.35
SHOX2-202ENST00000425436 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 BHMT2Q9H2M3 363 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 PRKAG2Q9UGJ0 569 aa17.26■□□□□ 0.35
SHOX2-202ENST00000425436 MAGEB2O15479 319 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 MAFO75444 373 aaPredicted RBP17.25■□□□□ 0.35
SHOX2-202ENST00000425436 RAG1P15918 1043 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 CLCN3P51790 818 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 CCL23P55773 120 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 SPAG1Q07617 926 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 DRP2Q13474 957 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 TPD52L1Q16890 204 aaPredicted RBP17.25■□□□□ 0.35
SHOX2-202ENST00000425436 TRIM71Q2Q1W2 868 aaKnown RBP17.25■□□□□ 0.35
SHOX2-202ENST00000425436 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 LRRC8AQ8IWT6 810 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 KIAA0319LQ8IZA0 1049 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 KIAA1524Q8TCG1 905 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
SHOX2-202ENST00000425436 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
SHOX2-202ENST00000425436 SMIM35A0A1B0GVV1 85 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 PVALEFA0A1B0GWK0 134 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 ARHGEF35A5YM69 484 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 OFD1O75665 1012 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 EYA4O95677 639 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 TIMP1P01033 207 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 CKBP12277 381 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
SHOX2-202ENST00000425436 PAK1Q13153 545 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SHOX2-202ENST00000425436 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHOX2-202ENST00000425436 ZNF618Q5T7W0 954 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 RETREG2Q8NC44 543 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 ANKRD20A12PQ8NF67 263 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 STAMQ92783 540 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 PPP1R16BQ96T49 567 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 SPTLC3Q9NUV7 552 aa17.24■□□□□ 0.35
SHOX2-202ENST00000425436 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
SHOX2-202ENST00000425436 VTNP04004 478 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHOX2-202ENST00000425436 CTSHP09668 335 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 BFSP2Q13515 415 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 FILIP1Q7Z7B0 1213 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 TMEM143Q96AN5 459 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
SHOX2-202ENST00000425436 SCLYQ96I15 445 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
SHOX2-202ENST00000425436 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 DHX33Q9H6R0 707 aaKnown RBP17.23■□□□□ 0.35
SHOX2-202ENST00000425436 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
SHOX2-202ENST00000425436 IGKV6-21A0A0C4DH24 114 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 H0YGN5 161 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 PLA2G4BP0C869 781 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 TMOD1P28289 359 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 CASP1P29466 404 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 RFC5P40937 340 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 EMC2Q15006 297 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 LINC01465Q8N7H1 131 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 CAGE1Q8TC20 777 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 NOC3LQ8WTT2 800 aaKnown RBP17.22■□□□□ 0.35
SHOX2-202ENST00000425436 BADQ92934 168 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 AKT3Q9Y243 479 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 CEP290O15078 2479 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 SCN5AQ14524 2016 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
SHOX2-202ENST00000425436 PSMA7O14818 248 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 KLRC4O43908 158 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 CHRNA1P02708 482 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 CD44P16070 742 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms