RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 GLP2RO95838 553 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 P4HBP07237 508 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 XBP1P17861 261 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 LAG3P18627 525 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 FGFR4P22455 802 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 SMAD4Q13485 552 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 PDE12Q6L8Q7 609 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 TMEM184AQ6ZMB5 413 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 ZNF410Q86VK4 478 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 PPP2R3CQ969Q6 453 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 GCOM2Q9BZD3 368 aaPredicted RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 DHX33Q9H6R0 707 aaKnown RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 IFT122Q9HBG6 1241 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 CYP26B1Q9NR63 512 aa18.13■□□□□ 0.49
DDR1-234ENST00000424544 SUCLA2Q9P2R7 463 aaPredicted RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 ORC3Q9UBD5 711 aaPredicted RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 ARIH1Q9Y4X5 557 aaPredicted RBP18.13■□□□□ 0.49
DDR1-234ENST00000424544 A0A087WZ62 844 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 ZNF623O75123 536 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 LARGE1O95461 756 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 IBSPP21815 317 aaPredicted RBP18.12■□□□□ 0.49
DDR1-234ENST00000424544 DNM2P50570 870 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 EPHA7Q15375 998 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 KCNT2Q6UVM3 1135 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 C4orf19Q8IY42 314 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 NECAB1Q8N987 351 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 SMRP1Q8NCR6 262 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 NLRP7Q8WX94 980 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 GTF3C6Q969F1 213 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 FDXACB1Q9BRP7 624 aaPredicted RBP18.12■□□□□ 0.49
DDR1-234ENST00000424544 TLR9Q9NR96 1032 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 CD207Q9UJ71 328 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
DDR1-234ENST00000424544 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 CCNT1O60563 726 aaKnown RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 ALADP13716 330 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 SSTR3P32745 418 aaPredicted RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 ANP32AP39687 249 aaKnown RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 NRIP1P48552 1158 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 NPEPPSP55786 919 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 NR5A1Q13285 461 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 DUSP6Q16828 381 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 KSR1Q8IVT5 923 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 HSCBQ8IWL3 235 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 MRPS27Q92552 414 aaKnown RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 WASF1Q92558 559 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
DDR1-234ENST00000424544 TLE6Q9H808 572 aa18.11■□□□□ 0.49
DDR1-234ENST00000424544 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDR1-234ENST00000424544 SLITRK3O94933 977 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 CSPG5O95196 566 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 PHKA2P46019 1235 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 CLUL1Q15846 466 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 PLA2G4FQ68DD2 849 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 RBM23Q86U06 439 aaKnown RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 RHPN2Q8IUC4 686 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 THNSL1Q8IYQ7 743 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 LRRC43Q8N309 656 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 CDCA3Q99618 268 aaPredicted RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 HSD17B14Q9BPX1 270 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 INO80BQ9C086 356 aaPredicted RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
DDR1-234ENST00000424544 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
DDR1-234ENST00000424544 PRR33A8MZF0 331 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
DDR1-234ENST00000424544 PER2O15055 1255 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 ZBTB39O15060 712 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
DDR1-234ENST00000424544 ST3GAL1Q11201 340 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 BECN1Q14457 450 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 EXOC8Q8IYI6 725 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 MICAL1Q8TDZ2 1067 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 PRPF31Q8WWY3 499 aaKnown RBP18.09■□□□□ 0.49
DDR1-234ENST00000424544 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 TMX3Q96JJ7 454 aa18.09■□□□□ 0.49
DDR1-234ENST00000424544 NGRNQ9NPE2 291 aaKnown RBP18.09■□□□□ 0.49
DDR1-234ENST00000424544 BTBD18B2RXH4 712 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 LYPLA2O95372 231 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.48
DDR1-234ENST00000424544 HOXA11P31270 313 aaPredicted RBP18.08■□□□□ 0.48
DDR1-234ENST00000424544 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
DDR1-234ENST00000424544 KRT2P35908 639 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 NDUFV1P49821 464 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 SLFN12Q8IYM2 578 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 HELQQ8TDG4 1101 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 SUSD6Q92537 303 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 CEP170P1Q96L14 293 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 ZNF558Q96NG5 402 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms