RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 IGKV6-21A0A0C4DH24 114 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 PVALEFA0A1B0GWK0 134 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.03
PRPF39-202ENST00000424478 ARL2P36404 184 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 RFC5P40937 340 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 ZNF131P52739 623 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 NLRP11P59045 1033 aaKnown RBP14.83□□□□□ -0.03
PRPF39-202ENST00000424478 PKN2Q16513 984 aaKnown RBP14.83□□□□□ -0.03
PRPF39-202ENST00000424478 PAWRQ96IZ0 340 aaKnown RBP14.83□□□□□ -0.03
PRPF39-202ENST00000424478 DRC1Q96MC2 740 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 FDXACB1Q9BRP7 624 aaPredicted RBP14.83□□□□□ -0.03
PRPF39-202ENST00000424478 KMT5AQ9NQR1 393 aa14.83□□□□□ -0.03
PRPF39-202ENST00000424478 ADAM17P78536 824 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 PTGISQ16647 500 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 AOPEPQ8N6M6 819 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.04
PRPF39-202ENST00000424478 ODF2LQ9ULJ1 636 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 DNM1LO00429 736 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 B4GALT4O60513 344 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 IQCF3P0C7M6 154 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 NKX3-2P78367 333 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 DMP1Q13316 513 aaPredicted RBP14.83□□□□□ -0.04
PRPF39-202ENST00000424478 KCNB1Q14721 858 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 HAUS6Q7Z4H7 955 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 OSMRQ99650 979 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 PRDM10Q9NQV6 1147 aa14.83□□□□□ -0.04
PRPF39-202ENST00000424478 LARSQ9P2J5 1176 aaKnown RBP14.83□□□□□ -0.04
PRPF39-202ENST00000424478 CEP290O15078 2479 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 DENND3A2RUS2 1198 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
PRPF39-202ENST00000424478 MYL1P05976 194 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 ZNF165P49910 485 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 CNNM4Q6P4Q7 775 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 TAS1R3Q7RTX0 852 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 ZNF720Q7Z2F6 126 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 CREBRFQ8IUR6 639 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 NOC3LQ8WTT2 800 aaKnown RBP14.82□□□□□ -0.04
PRPF39-202ENST00000424478 NLRP7Q8WX94 980 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 ANO10Q9NW15 660 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 RMND1Q9NWS8 449 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 NOD1Q9Y239 953 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 CLIC2O15247 247 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 RETREG2Q8NC44 543 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 ZSWIM2Q8NEG5 633 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 TMEM40Q8WWA1 233 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 KIFAP3Q92845 792 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 SEMA6BQ9H3T3 888 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 KCND2Q9NZV8 630 aa14.82□□□□□ -0.04
PRPF39-202ENST00000424478 MOXD2PA6NHM9 499 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 B4GALT5O43286 388 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 KPNA6O60684 536 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 KCTD17Q8N5Z5 321 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 LINC01465Q8N7H1 131 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 TMEM161BQ8NDZ6 487 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 NELFBQ8WX92 580 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 CCDC47Q96A33 483 aaKnown RBP14.81□□□□□ -0.04
PRPF39-202ENST00000424478 PHF24Q9UPV7 400 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 IBSPP21815 317 aaPredicted RBP14.81□□□□□ -0.04
PRPF39-202ENST00000424478 GJA8P48165 433 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 ADSSL1Q8N142 457 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 IFT74Q96LB3 600 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 CRISPLD2Q9H0B8 497 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 MBLAC1A4D2B0 266 aaPredicted RBP14.81□□□□□ -0.04
PRPF39-202ENST00000424478 INO80B-WBP1J3KQ70 363 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 IER5Q5VY09 327 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 DEPTORQ8TB45 409 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
PRPF39-202ENST00000424478 TMEM106CQ9BVX2 250 aa14.81□□□□□ -0.04
PRPF39-202ENST00000424478 INO80BQ9C086 356 aaPredicted RBP14.81□□□□□ -0.04
PRPF39-202ENST00000424478 RRN3P2A6NIE6 340 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 THPOP40225 353 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 DNM2P50570 870 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 PTPN21Q16825 1174 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 MYOCDQ8IZQ8 938 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 IFT122Q9HBG6 1241 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 COL1A2P08123 1366 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 ZMYM2Q9UBW7 1377 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 UMODL1Q5DID0 1318 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 GAP43P17677 238 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 ZBTB45Q96K62 511 aaPredicted RBP14.8□□□□□ -0.04
PRPF39-202ENST00000424478 PCIF1Q9H4Z3 704 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 OLFML3Q9NRN5 406 aa14.8□□□□□ -0.04
PRPF39-202ENST00000424478 MAGEB2O15479 319 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 HARSP12081 509 aaKnown RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 GPC3P51654 580 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 SEZ6Q53EL9 994 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 DHX40Q8IX18 779 aaKnown RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 MAP7D2Q96T17 732 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 ANKRD63C9JTQ0 380 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 TMOD1P28289 359 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 HOXC8P31273 242 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 EPM2AIP1Q7L775 607 aaPredicted RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 TRIML1Q8N9V2 468 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 TSEN34Q9BSV6 310 aaKnown RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 SAMSN1Q9NSI8 373 aaKnown RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms