RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 MCM6Q14566 821 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 ADALQ6DHV7 355 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 C1orf186Q6ZWK4 172 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 ASAP3Q8TDY4 903 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 IFT74Q96LB3 600 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 SLC4A7Q9Y6M7 1214 aa28.15■■■□□ 2.1
TSPAN3-203ENST00000424443 KRT18P05783 430 aaKnown RBP28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 GLRA2P23416 452 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 RESP18Q5W5W9 173 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 GPBP1Q86WP2 473 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 DRC1Q96MC2 740 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 FTHL17Q9BXU8 183 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 ST3GAL5Q9UNP4 418 aa28.14■■■□□ 2.1
TSPAN3-203ENST00000424443 SFPQP23246 707 aaKnown RBP eCLIP28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 RAD51AP2Q09MP3 1159 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 PPP2R5AQ15172 486 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 TPRNQ4KMQ1 711 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 SV2BQ7L1I2 683 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 FAM228AQ86W67 206 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 GOLGA6L4A6NEF3 574 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 LRRIQ4A6NIV6 560 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 HIP1RO75146 1068 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 GUCY2CP25092 1073 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 CAPSQ13938 189 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 SRGAP1Q7Z6B7 1085 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 IQUBQ8NA54 791 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 LRRC15Q8TF66 581 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 PYM1Q9BRP8 204 aaKnown RBP28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 IFT122Q9HBG6 1241 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 POLD4Q9HCU8 107 aa28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 CXXC1Q9P0U4 656 aaPredicted RBP28.13■■■□□ 2.09
TSPAN3-203ENST00000424443 POU5F1BQ06416 359 aa28.12■■■□□ 2.09
TSPAN3-203ENST00000424443 CSPP1Q1MSJ5 1256 aa28.12■■■□□ 2.09
TSPAN3-203ENST00000424443 TCTN1Q2MV58 587 aa28.12■■■□□ 2.09
TSPAN3-203ENST00000424443 FAM43BQ6ZT52 329 aaPredicted RBP28.12■■■□□ 2.09
TSPAN3-203ENST00000424443 ERVK-5Q9HDB9 667 aa28.12■■■□□ 2.09
TSPAN3-203ENST00000424443 CSDE1O75534 798 aaKnown RBP28.11■■■□□ 2.09
TSPAN3-203ENST00000424443 CMA1P23946 247 aa28.11■■■□□ 2.09
TSPAN3-203ENST00000424443 CATSPER4Q7RTX7 472 aa28.11■■■□□ 2.09
TSPAN3-203ENST00000424443 DHX58Q96C10 678 aa28.11■■■□□ 2.09
TSPAN3-203ENST00000424443 CUEDC2Q9H467 287 aa28.11■■■□□ 2.09
TSPAN3-203ENST00000424443 A0A087X0B3 334 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 POLR2DO15514 142 aaKnown RBP28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 FGFR4P22455 802 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 NAMPTP43490 491 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 PTENP60484 403 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 WDR5P61964 334 aaKnown RBP28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 NAALADL2Q58DX5 795 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 RASIP1Q5U651 963 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 ZBTB8OSQ8IWT0 167 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 KCNH3Q9ULD8 1083 aa28.1■■■□□ 2.09
TSPAN3-203ENST00000424443 DENND3A2RUS2 1198 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 RBAK-RBAKDNI3L0D1 243 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 AMHP03971 560 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 ZSCAN20P17040 1043 aaPredicted RBP28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 DEPTORQ8TB45 409 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 SLC9A7Q96T83 725 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 C2orf40Q9H1Z8 148 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 C17orf75Q9HAS0 396 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 ODF2LQ9ULJ1 636 aa28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 RANBP2P49792 3224 aaKnown RBP28.09■■■□□ 2.09
TSPAN3-203ENST00000424443 NPHP3-ACAD11A0A0J9YXS1 232 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 INO80B-WBP1J3KQ70 363 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 ERLIN2O94905 339 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 ATP2A2P16615 1042 aaKnown RBP28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 DMP1Q13316 513 aaPredicted RBP28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 ARSHQ5FYA8 562 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 NFKBIZQ9BYH8 718 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 LRRC27Q9C0I9 530 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 KCNG1Q9UIX4 513 aa28.08■■■□□ 2.09
TSPAN3-203ENST00000424443 A0A1B0GVL5 298 aa28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 CCDC169A6NNP5 214 aa28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 NCBP1Q09161 790 aaKnown RBP28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 MYOCDQ8IZQ8 938 aa28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 PHOSPHO2Q8TCD6 241 aa28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 REEP2Q9BRK0 252 aa28.08■■■□□ 2.08
TSPAN3-203ENST00000424443 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 A0A1W2PQ27 194 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 A0A1W2PQ64 194 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 A0A1W2PQD8 194 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 SFI1A8K8P3 1242 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 TBCAO75347 108 aaKnown RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 FAM13AO94988 1023 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 PEX3P56589 373 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 CACNB1Q02641 598 aaPredicted RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 PCBP1Q15365 356 aaKnown RBP eCLIP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 IFNLR1Q8IU57 520 aaPredicted RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 DAW1Q8N136 415 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 BSNDQ8WZ55 320 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 TMX1Q9H3N1 280 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 ZHX3Q9H4I2 956 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 MINDY3Q9H8M7 445 aa28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 LARSQ9P2J5 1176 aaKnown RBP28.07■■■□□ 2.08
TSPAN3-203ENST00000424443 MICAL3Q7RTP6 2002 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 ENPP3O14638 875 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 PFKFB1P16118 471 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 AMPD3Q01432 767 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 MAPK7Q13164 816 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 E2F4Q16254 413 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms