RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 THNSL1Q8IYQ7 743 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 LRRC43Q8N309 656 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 RSPH1Q8WYR4 309 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 SCLT1Q96NL6 688 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.24
SRRT-201ENST00000423692 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
SRRT-201ENST00000423692 CYP26B1Q9NR63 512 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 DACT1Q9NYF0 836 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 WRAP73Q9P2S5 460 aaPredicted RBP16.52■□□□□ 0.24
SRRT-201ENST00000423692 RAPGEFL1Q9UHV5 662 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 PCDHGC5Q9Y5F6 944 aa16.52■□□□□ 0.24
SRRT-201ENST00000423692 PLXNA4Q9HCM2 1894 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
SRRT-201ENST00000423692 DTNBO60941 627 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 CSDE1O75534 798 aaKnown RBP16.51■□□□□ 0.23
SRRT-201ENST00000423692 GLP2RO95838 553 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 ALADP13716 330 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 NDUFV1P49821 464 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 SPIRE1Q08AE8 756 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 CLUL1Q15846 466 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 PLA2G4FQ68DD2 849 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 KCNT2Q6UVM3 1135 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 C4orf19Q8IY42 314 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 EXOC8Q8IYI6 725 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
SRRT-201ENST00000423692 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
SRRT-201ENST00000423692 CDCA3Q99618 268 aaPredicted RBP16.51■□□□□ 0.23
SRRT-201ENST00000423692 DHX33Q9H6R0 707 aaKnown RBP16.51■□□□□ 0.23
SRRT-201ENST00000423692 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 LARGE1O95461 756 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 SFPQP23246 707 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRRT-201ENST00000423692 PPM1AP35813 382 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 KRT2P35908 639 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 PHKA2P46019 1235 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 NPEPPSP55786 919 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 NR5A1Q13285 461 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 DUSP6Q16828 381 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 RHPN2Q8IUC4 686 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 SMRP1Q8NCR6 262 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 ZNF558Q96NG5 402 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 TLE6Q9H808 572 aa16.5■□□□□ 0.23
SRRT-201ENST00000423692 PUF60Q9UHX1 559 aaKnown RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
SRRT-201ENST00000423692 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 ZNF623O75123 536 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 SKIP12755 728 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 RFC5P40937 340 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 KCNC3Q14003 757 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 KSR1Q8IVT5 923 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 MRPL9Q9BYD2 267 aaKnown RBP16.49■□□□□ 0.23
SRRT-201ENST00000423692 IFT122Q9HBG6 1241 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 BRMS1Q9HCU9 246 aa16.49■□□□□ 0.23
SRRT-201ENST00000423692 PER2O15055 1255 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 DCXO43602 365 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
SRRT-201ENST00000423692 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
SRRT-201ENST00000423692 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 RNF169Q8NCN4 708 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 VN1R2Q8NFZ6 395 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 LXNQ9BS40 222 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 ZSWIM4Q9H7M6 989 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
SRRT-201ENST00000423692 SPG21Q9NZD8 308 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 RGL1Q9NZL6 768 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 COL4A3BPQ9Y5P4 624 aa16.48■□□□□ 0.23
SRRT-201ENST00000423692 FAM86C2PA6NEL3 165 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 PRR33A8MZF0 331 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 MARCH6O60337 910 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 SLITRK3O94933 977 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 LYPLA2O95372 231 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
SRRT-201ENST00000423692 NEK4P51957 841 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 KRT17Q04695 432 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
SRRT-201ENST00000423692 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
SRRT-201ENST00000423692 DYDC2Q96IM9 177 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 HSD17B14Q9BPX1 270 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 TCF25Q9BQ70 676 aa16.47■□□□□ 0.23
SRRT-201ENST00000423692 AGPAT5Q9NUQ2 364 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms