RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 HAS1Q92839 578 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 TNFRSF25Q93038 417 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 CEP170P1Q96L14 293 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 NLRP4Q96MN2 994 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 ZNF558Q96NG5 402 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 CASD1Q96PB1 797 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 LZTS1Q9Y250 596 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 ARID2Q68CP9 1835 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 A0A087WZ62 844 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 NEMFO60524 1076 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 SKIP12755 728 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 COL9A1P20849 921 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 IRS1P35568 1242 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 RAB27AP51159 221 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 EARS2Q5JPH6 523 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 TWF2Q6IBS0 349 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 ADGRD2Q7Z7M1 963 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 MICAL1Q8TDZ2 1067 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 PSPC1Q8WXF1 523 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 POP1Q99575 1024 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 TRAIPQ9BWF2 469 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 CWH43Q9H720 699 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 RNF19AQ9NV58 838 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 HCSTQ9UBK5 93 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 PUF60Q9UHX1 559 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 CD207Q9UJ71 328 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 PIN4Q9Y237 131 aaKnown RBP18.78■□□□□ 0.6
CCDC78-203ENST00000423653 COL4A3BPQ9Y5P4 624 aa18.78■□□□□ 0.6
CCDC78-203ENST00000423653 CARNS1A5YM72 827 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 FAM205CA6NFA0 338 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 DTNBO60941 627 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CSDE1O75534 798 aaKnown RBP18.77■□□□□ 0.6
CCDC78-203ENST00000423653 SRGAP2BP0DMP2 458 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 YWHABP31946 246 aaKnown RBP18.77■□□□□ 0.6
CCDC78-203ENST00000423653 NRIP1P48552 1158 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 NPEPPSP55786 919 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 ZP2Q05996 745 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 ADAM15Q13444 863 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 SMAD2Q15796 467 aaKnown RBP18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CLUL1Q15846 466 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CALCRLQ16602 461 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CLLU1OSQ5K130 101 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CATSPER4Q7RTX7 472 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 ADHFE1Q8IWW8 467 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 TCP11Q8WWU5 503 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 CDCA3Q99618 268 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-203ENST00000423653 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.6
CCDC78-203ENST00000423653 TLE6Q9H808 572 aa18.77■□□□□ 0.6
CCDC78-203ENST00000423653 LINC01565O15544 149 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 JAK2O60674 1132 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 PHKA2P46019 1235 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 PLCB3Q01970 1234 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 CYP4A11Q02928 519 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 KRT17Q04695 432 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 DLX2Q07687 328 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 EMC2Q15006 297 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 TMEM31Q5JXX7 168 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 ZNF598Q86UK7 904 aaKnown RBP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 MRPS27Q92552 414 aaKnown RBP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 CCDC43Q96MW1 224 aaKnown RBP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 CD320Q9NPF0 282 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 ENTPD7Q9NQZ7 604 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 WRAP73Q9P2S5 460 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-203ENST00000423653 PCDHA12Q9UN75 941 aa18.76■□□□□ 0.59
CCDC78-203ENST00000423653 BTBD18B2RXH4 712 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 MBTPS2O43462 519 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-203ENST00000423653 FOSBP53539 338 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 RBM23Q86U06 439 aaKnown RBP18.75■□□□□ 0.59
CCDC78-203ENST00000423653 HELQQ8TDG4 1101 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 DYDC2Q96IM9 177 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 EPHX3Q9H6B9 360 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 SPG21Q9NZD8 308 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 LIMCH1Q9UPQ0 1083 aa18.75■□□□□ 0.59
CCDC78-203ENST00000423653 PI4K2BG5E9Z4 385 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 FSCN2O14926 492 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 ALADP13716 330 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 COASYQ13057 564 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 CTTNQ14247 550 aaKnown RBP18.74■□□□□ 0.59
CCDC78-203ENST00000423653 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 GLB1LQ6UWU2 654 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 LRRC55Q6ZSA7 311 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 SRGAP1Q7Z6B7 1085 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 KSR1Q8IVT5 923 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 TPH2Q8IWU9 490 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 SMRP1Q8NCR6 262 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 MSLNLQ96KJ4 702 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 MTRQ99707 1265 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 TCF25Q9BQ70 676 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 IFT122Q9HBG6 1241 aa18.74■□□□□ 0.59
CCDC78-203ENST00000423653 NGRNQ9NPE2 291 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms