RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TMX1Q9H3N1 280 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 MTUS1Q9ULD2 1270 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 SZT2Q5T011 3432 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 A0A087WZ62 844 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 MED24O75448 989 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 BMP15O95972 392 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 SPATA31C1P0DKV0 1188 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 RARRES1P49788 294 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 ERVK-21P61565 698 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 TFDP1Q14186 410 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 CATSPER4Q7RTX7 472 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 RTN4RL1Q86UN2 441 aaPredicted RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 FDXACB1Q9BRP7 624 aaPredicted RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 DACT1Q9NYF0 836 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 DBR1Q9UK59 544 aaKnown RBP12.18□□□□□ -0.46
USP49-204ENST00000423567 RWDD3Q9Y3V2 267 aa12.18□□□□□ -0.46
USP49-204ENST00000423567 ADGRA3Q8IWK6 1321 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 HOXA2O43364 376 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
USP49-204ENST00000423567 DGKIO75912 1065 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 ARHGEF15O94989 841 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 SRGAP2CP0DJJ0 459 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 SYT1P21579 422 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 PHKA2P46019 1235 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 ATP2C1P98194 919 aaPredicted RBP12.17□□□□□ -0.46
USP49-204ENST00000423567 LAMTOR4Q0VGL1 99 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 IGSF22Q8N9C0 903 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 RNF149Q8NC42 400 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 CHST12Q9NRB3 414 aa12.17□□□□□ -0.46
USP49-204ENST00000423567 LAMA2P24043 3122 aaKnown RBP12.17□□□□□ -0.46
USP49-204ENST00000423567 A0A087WWV3 80 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 C9IYK1 514 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 RFXAPO00287 272 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 MGEA5O60502 916 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 FGFR4P22455 802 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 NCBP1Q09161 790 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 ADGRE1Q14246 886 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 DSC3Q14574 896 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 TMEM192Q8IY95 271 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 CDK5RAP3Q96JB5 506 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 ELAC1Q9H777 363 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 XPNPEP1Q9NQW7 623 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 TMEM161AQ9NX61 479 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 KIAA1024Q9UPX6 916 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
USP49-204ENST00000423567 SIP14410 1827 aa12.16□□□□□ -0.46
USP49-204ENST00000423567 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 ERLIN2O94905 339 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 SKIP12755 728 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 CTNNB1P35222 781 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 FAM189BP81408 668 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 GRB10Q13322 594 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP49-204ENST00000423567 ZRSR1Q15695 479 aaKnown RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 PTPROQ16827 1216 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 PAN2Q504Q3 1202 aaKnown RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 TWF2Q6IBS0 349 aaKnown RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 ABI1Q8IZP0 508 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 SLC17A8Q8NDX2 589 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 POLR3FQ9H1D9 316 aaPredicted RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 RC3H2Q9HBD1 1191 aaKnown RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
USP49-204ENST00000423567 DNM3Q9UQ16 869 aa12.15□□□□□ -0.46
USP49-204ENST00000423567 EVPLQ92817 2033 aa12.15□□□□□ -0.47
USP49-204ENST00000423567 GBF1Q92538 1859 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 WDR81Q562E7 1941 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 A0A0U1RQF3 1178 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 INO80B-WBP1J3KQ70 363 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms