RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 FAM102BQ5T8I3 360 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 ZNF410Q86VK4 478 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 RNF149Q8NC42 400 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 PRPF31Q8WWY3 499 aaKnown RBP10.75□□□□□ -0.69
HERC3-204ENST00000422770 LINC01599Q8WXQ3 324 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 GUCD1Q96NT3 240 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 CEP89Q96ST8 783 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 CDX2Q99626 313 aaPredicted RBP10.75□□□□□ -0.69
HERC3-204ENST00000422770 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
HERC3-204ENST00000422770 ADAMTS10Q9H324 1103 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 DHX33Q9H6R0 707 aaKnown RBP10.75□□□□□ -0.69
HERC3-204ENST00000422770 PIN4Q9Y237 131 aaKnown RBP10.75□□□□□ -0.69
HERC3-204ENST00000422770 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 PCDHB7Q9Y5E2 793 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
HERC3-204ENST00000422770 MGEA5O60502 916 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 ERLIN2O94905 339 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 PHKA2P46019 1235 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 KRT85P78386 507 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 TAP1Q03518 808 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 SPOUT1Q5T280 376 aaKnown RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 TWF2Q6IBS0 349 aaKnown RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 PADI6Q6TGC4 694 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 CABP7Q86V35 215 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 IGSF22Q8N9C0 903 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 PPM1EQ8WY54 764 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 TOP1MTQ969P6 601 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 ZNF396Q96N95 335 aaPredicted RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 BHMT2Q9H2M3 363 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 TMX1Q9H3N1 280 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 GPRC5CQ9NQ84 441 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 DBR1Q9UK59 544 aaKnown RBP10.74□□□□□ -0.69
HERC3-204ENST00000422770 DNM3Q9UQ16 869 aa10.74□□□□□ -0.69
HERC3-204ENST00000422770 LINC01553A4QN01 128 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 E9PMD0 336 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 INO80B-WBP1J3KQ70 363 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 RFXAPO00287 272 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 ARHGEF15O94989 841 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 CSPG5O95196 566 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 XRCC6P12956 609 aaKnown RBP eCLIP10.73□□□□□ -0.69
HERC3-204ENST00000422770 UBA7P41226 1012 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 SARSP49591 514 aaKnown RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 GATMP50440 423 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 BTG3Q14201 252 aaPredicted RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 DHX8Q14562 1220 aaKnown RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 MXD4Q14582 209 aaPredicted RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 STK38Q15208 465 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 ECM1Q16610 540 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 LONRF3Q496Y0 759 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 SPRED2Q7Z698 418 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 NPAS4Q8IUM7 802 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 FIBCD1Q8N539 461 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 ASAP3Q8TDY4 903 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 TGS1Q96RS0 853 aaKnown RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 POLD4Q9HCU8 107 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 XPNPEP1Q9NQW7 623 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 C1orf112Q9NSG2 853 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
HERC3-204ENST00000422770 ADGRA3Q8IWK6 1321 aa10.73□□□□□ -0.69
HERC3-204ENST00000422770 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 GOLGA6L22H0YM25 854 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 ASAP2O43150 1006 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 MUTP22033 750 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 CTNNB1P35222 781 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 RAD51AP2Q09MP3 1159 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 CAPSQ13938 189 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 CCDC85BQ15834 202 aaPredicted RBP10.72□□□□□ -0.69
HERC3-204ENST00000422770 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 SLC24A5Q71RS6 500 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 SRGAP1Q7Z6B7 1085 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 ZBTB8OSQ8IWT0 167 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 ABI1Q8IZP0 508 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 FBXO22Q8NEZ5 403 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 MAFAQ8NHW3 353 aaPredicted RBP10.72□□□□□ -0.69
HERC3-204ENST00000422770 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 C17orf80Q9BSJ5 609 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 NT5C3AQ9H0P0 336 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 DACT1Q9NYF0 836 aa10.72□□□□□ -0.69
HERC3-204ENST00000422770 TDRD15B5MCY1 1934 aaKnown RBP10.72□□□□□ -0.69
HERC3-204ENST00000422770 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 EYA4O95677 639 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 KRT18P05783 430 aaKnown RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 FGFR1P11362 822 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 GLRA2P23416 452 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 LONP1P36776 959 aaKnown RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 TXLNAP40222 546 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms