RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ORC3Q9UBD5 711 aaPredicted RBP9.21□□□□□ -0.94
TRIM43CP-201ENST00000422468 AKT3Q9Y243 479 aa9.21□□□□□ -0.94
TRIM43CP-201ENST00000422468 PCDHB7Q9Y5E2 793 aa9.21□□□□□ -0.94
TRIM43CP-201ENST00000422468 ARID2Q68CP9 1835 aa9.21□□□□□ -0.94
TRIM43CP-201ENST00000422468 TMEM150BA6NC51 233 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 C9IYK1 514 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 NCK2O43639 380 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 MMP1P03956 469 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 GCFC2P16383 781 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 EIF4BP23588 611 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 DDIT3P35638 169 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 GATMP50440 423 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 NLRP11P59045 1033 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 FAM189BP81408 668 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 SPIRE1Q08AE8 756 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 TBC1D8BQ0IIM8 1120 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 DSC3Q14574 896 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 TARBP2Q15633 366 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 SKOR2Q2VWA4 1001 aaPredicted RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 LETM2Q2VYF4 491 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 PPP4R3AQ6IN85 833 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 NEK8Q86SG6 692 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 LRRC71Q8N4P6 559 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 NEK9Q8TD19 979 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 HAS1Q92839 578 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 PABPC5Q96DU9 382 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 TMX3Q96JJ7 454 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 FAM20AQ96MK3 541 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 CEP89Q96ST8 783 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 NAP1L4Q99733 375 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 ALG13Q9NP73 1137 aaKnown RBP9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 LIMCH1Q9UPQ0 1083 aa9.2□□□□□ -0.94
TRIM43CP-201ENST00000422468 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 EML1O00423 815 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 TBX3O15119 743 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 ITGB1P05556 798 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 DARSP14868 501 aaKnown RBP9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 IBSPP21815 317 aaPredicted RBP9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 DNAJB1P25685 340 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 DNM2P50570 870 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 TOB1P50616 345 aaPredicted RBP9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 GPC3P51654 580 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 CDC42EP1Q00587 391 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 PPP2R5CQ13362 524 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 MTERF2Q49AM1 385 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 SPPL3Q8TCT6 385 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 TMEM60Q9H2L4 133 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 ATP6V0A4Q9HBG4 840 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 KCNMB3Q9NPA1 279 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 TMEM161AQ9NX61 479 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 SEPT9Q9UHD8 586 aaPredicted RBP9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 VAV3Q9UKW4 847 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 PCDHB12Q9Y5F1 795 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 TRIOO75962 3097 aa9.19□□□□□ -0.94
TRIM43CP-201ENST00000422468 IGKV6-21A0A0C4DH24 114 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 H3BQ06 376 aaPredicted RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 MAP3K7O43318 606 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 CCNT1O60563 726 aaKnown RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 DKC1O60832 514 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 MAFO75444 373 aaPredicted RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 FGFR1P11362 822 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZSCAN20P17040 1043 aaPredicted RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 QARSP47897 775 aaKnown RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 MRE11P49959 708 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 PSMC5P62195 406 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 HYAL1Q12794 435 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 CAMK1Q14012 370 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 CTC1Q2NKJ3 1217 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 SPOUT1Q5T280 376 aaKnown RBP9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 FAM102BQ5T8I3 360 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 EP400NLQ6ZTU2 488 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 PIK3AP1Q6ZUJ8 805 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 ANO5Q75V66 913 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 FAM178BQ8IXR5 827 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 SCLT1Q96NL6 688 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 CLDND1Q9NY35 253 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 FAM50BQ9Y247 325 aa9.18□□□□□ -0.94
TRIM43CP-201ENST00000422468 HOXA2O43364 376 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 MARCH6O60337 910 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 NUDT7P0C024 238 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 KRT2P35908 639 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 LTBRP36941 435 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 UBE3AQ05086 875 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 DRP2Q13474 957 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 RABEP1Q15276 862 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 CLEC17AQ6ZS10 378 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms