RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 NLRP5P59047 1200 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 XKR3Q5GH77 459 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 MIER3Q7Z3K6 550 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 TRIM22Q8IYM9 498 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 NLRP7Q8WX94 980 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 ZSWIM6Q9HCJ5 1215 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 CHST12Q9NRB3 414 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 SEPT9Q9UHD8 586 aaPredicted RBP20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 C2orf16Q68DN1 1984 aa20.97■□□□□ 0.95
AC004540.1-203ENST00000421862 DEXIO95424 95 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 HOXB8P17481 243 aaPredicted RBP20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 TECP42680 631 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 MRE11P49959 708 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 CDC42EP1Q00587 391 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 KRT17Q04695 432 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 SIGLEC14Q08ET2 396 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 ZNF410Q86VK4 478 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 BLIDQ8IZY5 108 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 HELQQ8TDG4 1101 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 RPGRIP1Q96KN7 1286 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 SCLT1Q96NL6 688 aa20.96■□□□□ 0.95
AC004540.1-203ENST00000421862 TMEM150BA6NC51 233 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 C2orf71A6NGG8 1288 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 SMC1AQ14683 1233 aaKnown RBP20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 MTERF2Q49AM1 385 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 RNF169Q8NCN4 708 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 PRSS33Q8NF86 280 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 ASIC4Q96FT7 647 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 GCOM2Q9BZD3 368 aaPredicted RBP20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 HCFC2Q9Y5Z7 792 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 MYO10Q9HD67 2058 aa20.95■□□□□ 0.94
AC004540.1-203ENST00000421862 SFPQP23246 707 aaKnown RBP eCLIP20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 PHKA2P46019 1235 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 SSRP1Q08945 709 aaKnown RBP20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 PTPN21Q16825 1174 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 GALNT17Q6IS24 598 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 TMC7Q7Z402 723 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 MRPL43Q8N983 215 aaKnown RBP20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 CASP10Q92851 521 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 TDRD15B5MCY1 1934 aaKnown RBP20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 USP34Q70CQ2 3546 aa20.94■□□□□ 0.94
AC004540.1-203ENST00000421862 A0A087WZ62 844 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 MAFO75444 373 aaPredicted RBP20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 CSDE1O75534 798 aaKnown RBP20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 BCAR1P56945 870 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 LLGL2Q6P1M3 1020 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 ANO5Q75V66 913 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 FBXL6Q8N531 539 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 PBXIP1Q96AQ6 731 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 FDXACB1Q9BRP7 624 aaPredicted RBP20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 TM6SF1Q9BZW5 370 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 ZBP1Q9H171 429 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 IRAK3Q9Y616 596 aa20.93■□□□□ 0.94
AC004540.1-203ENST00000421862 CACNA1HO95180 2353 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 CARNS1A5YM72 827 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 SLC37A4O43826 429 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 PPP2R5CQ13362 524 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 NONOQ15233 471 aaKnown RBP eCLIP20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 TMEM173Q86WV6 379 aaPredicted RBP20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 AIFM3Q96NN9 605 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 SH2D3AQ9BRG2 576 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 KCNMB3Q9NPA1 279 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 VAV3Q9UKW4 847 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 PLXNA3P51805 1871 aa20.92■□□□□ 0.94
AC004540.1-203ENST00000421862 CLASP2O75122 1294 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 SKIP12755 728 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 DNM2P50570 870 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 RAB27AP51159 221 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 PSMC5P62195 406 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 ITIH3Q06033 890 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 KRT25Q7Z3Z0 450 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 SUGP1Q8IWZ8 645 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 TMEM169Q96HH4 297 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 NECTIN4Q96NY8 510 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 PRRX2Q99811 253 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 INO80BQ9C086 356 aaPredicted RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 FAM105AQ9NUU6 356 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 SUCLA2Q9P2R7 463 aaPredicted RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 DDX25Q9UHL0 483 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 CDH22Q9UJ99 828 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 PIN4Q9Y237 131 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 CYP46A1Q9Y6A2 500 aa20.91■□□□□ 0.94
AC004540.1-203ENST00000421862 CPLX1O14810 134 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 ZNF623O75123 536 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 ALDH7A1P49419 539 aaKnown RBP20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 POLGP54098 1239 aaPredicted RBP20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 INF2Q27J81 1249 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 IER5LQ5T953 404 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 PLA2G4FQ68DD2 849 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 TWF2Q6IBS0 349 aaKnown RBP20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 RHPN2Q8IUC4 686 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 JPH2Q9BR39 696 aaPredicted RBP20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 PHF20Q9BVI0 1012 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 APOL5Q9BWW9 433 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 POMKQ9H5K3 350 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 IFT122Q9HBG6 1241 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms