RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ENPP3O14638 875 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 ZSCAN20P17040 1043 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-202ENST00000421712 PHKA2P46019 1235 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 RABGGTBP53611 331 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 FAM109BQ6ICB4 259 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-202ENST00000421712 RINT1Q6NUQ1 792 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 FAM117BQ6P1L5 589 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 SYT2Q8N9I0 419 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-202ENST00000421712 PHOSPHO2Q8TCD6 241 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 ASAP3Q8TDY4 903 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 SPATA32Q96LK8 384 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 MSRAQ9UJ68 235 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 RCOR1Q9UKL0 485 aa17.47■□□□□ 0.39
BRAT1-202ENST00000421712 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-202ENST00000421712 SFPQP23246 707 aaKnown RBP eCLIP17.46■□□□□ 0.39
BRAT1-202ENST00000421712 GLRA2P23416 452 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 SMAD3P84022 425 aaKnown RBP17.46■□□□□ 0.39
BRAT1-202ENST00000421712 RAD51AP2Q09MP3 1159 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 MCM6Q14566 821 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 CATSPER4Q7RTX7 472 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-202ENST00000421712 RAD54LQ92698 747 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 KIFAP3Q92845 792 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 LRCH3Q96II8 777 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 ADAM2Q99965 735 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 RUSC1Q9BVN2 902 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 IFT122Q9HBG6 1241 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
BRAT1-202ENST00000421712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-202ENST00000421712 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
BRAT1-202ENST00000421712 SLC12A3P55017 1021 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 CAPSQ13938 189 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 C1orf186Q6ZWK4 172 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 HERC6Q8IVU3 1022 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 PDILTQ8N807 584 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-202ENST00000421712 MICAL3Q7RTP6 2002 aa17.45■□□□□ 0.38
BRAT1-202ENST00000421712 TLL1O43897 1013 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 HIP1RO75146 1068 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 ERLIN2O94905 339 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 DDIT3P35638 169 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 PBX2P40425 430 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 STAT6P42226 847 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 PTENP60484 403 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 NCBP1Q09161 790 aaKnown RBP17.44■□□□□ 0.38
BRAT1-202ENST00000421712 PPP2R5AQ15172 486 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 RAB30Q15771 203 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 RTN4RL1Q86UN2 441 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-202ENST00000421712 GPBP1Q86WP2 473 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 ZBTB8OSQ8IWT0 167 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 DEPTORQ8TB45 409 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-202ENST00000421712 LARP4BQ92615 738 aaKnown RBP17.44■□□□□ 0.38
BRAT1-202ENST00000421712 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 PBX4Q9BYU1 374 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 TSPYL2Q9H2G4 693 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-202ENST00000421712 BLOC1S4Q9NUP1 217 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 FAM13BQ9NYF5 915 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 STK17AQ9UEE5 414 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 LRFN2Q9ULH4 789 aa17.44■□□□□ 0.38
BRAT1-202ENST00000421712 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 CCDC169A6NNP5 214 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 SFI1A8K8P3 1242 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 MGEA5O60502 916 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 LIG1P18858 919 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 FXR1P51114 621 aaKnown RBP eCLIP17.43■□□□□ 0.38
BRAT1-202ENST00000421712 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 AXDND1Q5T1B0 1012 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-202ENST00000421712 SHC4Q6S5L8 630 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 TOP1MTQ969P6 601 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 TIFAQ96CG3 184 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 TIPINQ9BVW5 301 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 MINDY3Q9H8M7 445 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 C1orf112Q9NSG2 853 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 CIZ1Q9ULV3 898 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-202ENST00000421712 PIN4Q9Y237 131 aaKnown RBP17.43■□□□□ 0.38
BRAT1-202ENST00000421712 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
BRAT1-202ENST00000421712 PCDHB7Q9Y5E2 793 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 PCDHA11Q9Y5I1 949 aa17.43■□□□□ 0.38
BRAT1-202ENST00000421712 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 MYOGP15173 224 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 DNAJB2P25686 324 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 NAMPTP43490 491 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 PEX3P56589 373 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-202ENST00000421712 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-202ENST00000421712 TMEM132AQ24JP5 1023 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 TWF2Q6IBS0 349 aaKnown RBP17.42■□□□□ 0.38
BRAT1-202ENST00000421712 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-202ENST00000421712 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms